RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 KDM4AO75164 1064 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
DDB1-211ENST00000538280 ADRA2BP18089 450 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
DDB1-211ENST00000538280 ALX1Q15699 326 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 WASHC4Q2M389 1173 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 PARP10Q53GL7 1025 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 SUSD4Q5VX71 490 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 CCDC102BQ68D86 513 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 LPIN2Q92539 896 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 NBPF3Q9H094 633 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
DDB1-211ENST00000538280 CFAP45Q9UL16 551 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
DDB1-211ENST00000538280 H3BQV1 296 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 RGL2O15211 777 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 PRC1O43663 620 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 CAPN15O75808 1086 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 NTSR2O95665 410 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 CCDC192P0DO97 292 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
DDB1-211ENST00000538280 PHKA1P46020 1223 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 TERF1P54274 439 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 FGD1P98174 961 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 JMYQ8N9B5 988 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 COL4A1P02462 1669 aa10.84□□□□□ -0.67
DDB1-211ENST00000538280 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
DDB1-211ENST00000538280 FER1L6Q2WGJ9 1857 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 NID2Q14112 1375 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 ZNF213O14771 459 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 SLC5A1P13866 664 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 PDE6AP16499 860 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 TYRO3Q06418 890 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.83□□□□□ -0.68
DDB1-211ENST00000538280 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 ZNF396Q96N95 335 aaPredicted RBP10.83□□□□□ -0.68
DDB1-211ENST00000538280 UTP14AQ9BVJ6 771 aaKnown RBP10.83□□□□□ -0.68
DDB1-211ENST00000538280 NCOA5Q9HCD5 579 aaKnown RBP10.83□□□□□ -0.68
DDB1-211ENST00000538280 DACT1Q9NYF0 836 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 PIM2Q9P1W9 311 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 USP25Q9UHP3 1055 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 ZNF532Q9HCE3 1301 aa10.83□□□□□ -0.68
DDB1-211ENST00000538280 SH2B2O14492 632 aaPredicted RBP10.82□□□□□ -0.68
DDB1-211ENST00000538280 AP5Z1O43299 807 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 ADCY5O95622 1261 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 HAND2P61296 217 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 CCT2P78371 535 aaKnown RBP10.82□□□□□ -0.68
DDB1-211ENST00000538280 DALRD3Q5D0E6 543 aaKnown RBP10.82□□□□□ -0.68
DDB1-211ENST00000538280 SLC9C2Q5TAH2 1124 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 CHST3Q7LGC8 479 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 STRBPQ96SI9 672 aaKnown RBP10.82□□□□□ -0.68
DDB1-211ENST00000538280 TNMDQ9H2S6 317 aa10.82□□□□□ -0.68
DDB1-211ENST00000538280 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
DDB1-211ENST00000538280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDB1-211ENST00000538280 KLF18A0A0U1RQI7 1052 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 CTAGE5O15320 804 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 DHX16O60231 1041 aaKnown RBP10.81□□□□□ -0.68
DDB1-211ENST00000538280 NR1I2O75469 434 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 TM4SF1P30408 202 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
DDB1-211ENST00000538280 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 SPATA5Q8NB90 893 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 ENGASEQ8NFI3 743 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 TDRD7Q8NHU6 1098 aaKnown RBP10.81□□□□□ -0.68
DDB1-211ENST00000538280 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
DDB1-211ENST00000538280 GOLGA6L4A6NEF3 574 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 GOLGA8BA8MQT2 603 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 CAVIN2O95810 425 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 TPM2P07951 284 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 FSTL1Q12841 308 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 RASGRF1Q13972 1273 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 CCDC152Q4G0S7 254 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 CYB5R4Q7L1T6 521 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 SGMS1Q86VZ5 419 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 BICD2Q8TD16 824 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 NAP1L5Q96NT1 182 aaPredicted RBP10.8□□□□□ -0.68
DDB1-211ENST00000538280 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
DDB1-211ENST00000538280 ZNF804BA4D1E1 1349 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 MAST2Q6P0Q8 1798 aa10.8□□□□□ -0.68
DDB1-211ENST00000538280 A0A1W2PQ27 194 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 A0A1W2PQ64 194 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 A0A1W2PQD8 194 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
DDB1-211ENST00000538280 NFKBIEO00221 500 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 ZBTB22O15209 634 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 IDH1O75874 414 aaKnown RBP10.79□□□□□ -0.68
DDB1-211ENST00000538280 YEATS4O95619 227 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 NFIXQ14938 502 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms