RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ZBTB43O43298 467 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 KINO60870 393 aaKnown RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 AKNAD1Q5T1N1 836 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 NFXL1Q6ZNB6 911 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 MFSD6Q6ZSS7 791 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 VPS37DQ86XT2 251 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 TBC1D10CQ8IV04 446 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 IFNL3Q8IZI9 196 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 FBXO18Q8NFZ0 1043 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 HELBQ8NG08 1087 aaPredicted RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 SETDB2Q96T68 719 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 DACT1Q9NYF0 836 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 RTEL1Q9NZ71 1219 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
USP28-206ENST00000538224 RTCBQ9Y3I0 505 aaKnown RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 BAZ2AQ9UIF9 1905 aaKnown RBP7.73□□□□□ -1.17
USP28-206ENST00000538224 LRRC37AA6NMS7 1700 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 GOLGA8AA7E2F4 631 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 B4E1Z4 1266 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 KCNQ2O43526 872 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 ZNF500O60304 480 aaPredicted RBP7.72□□□□□ -1.17
USP28-206ENST00000538224 KDM4AO75164 1064 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 ADRA2BP18089 450 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 LIG1P18858 919 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 TYRO3Q06418 890 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 STK38Q15208 465 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
USP28-206ENST00000538224 ERFEQ4G0M1 354 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 TMEM67Q5HYA8 995 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 APOA5Q6Q788 366 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 TPTE2Q6XPS3 522 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 CHST3Q7LGC8 479 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 NBPF5PQ86XG9 351 aaPredicted RBP7.72□□□□□ -1.17
USP28-206ENST00000538224 TRIM22Q8IYM9 498 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 MRPS27Q92552 414 aaKnown RBP7.72□□□□□ -1.17
USP28-206ENST00000538224 BRIP1Q9BX63 1249 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 POLR3EQ9NVU0 708 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 TFIP11Q9UBB9 837 aaKnown RBP7.72□□□□□ -1.17
USP28-206ENST00000538224 ANAPC4Q9UJX5 808 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 USP21Q9UK80 565 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 HPS5Q9UPZ3 1129 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 SLC12A7Q9Y666 1083 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 SLC4A4Q9Y6R1 1079 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 COL4A1P02462 1669 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 NEDD4P46934 1319 aa7.72□□□□□ -1.17
USP28-206ENST00000538224 COL1A1P02452 1464 aaPredicted RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 A0A0G2JLW4 131 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 GSG1L2A8MUP6 293 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 IFIT3O14879 490 aaKnown RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 GNPATO15228 680 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 CYP7A1P22680 504 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 ADD1P35611 737 aaKnown RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 IARSP41252 1262 aaKnown RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 ME1P48163 572 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 BCAMP50895 628 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 KIAA2012Q0VF49 1180 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 GNL2Q13823 731 aaKnown RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 WTAPQ15007 396 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 SAFBQ15424 915 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP28-206ENST00000538224 STX1AQ16623 288 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 ADALQ6DHV7 355 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 FAM173BQ6P4H8 233 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 CYB5R4Q7L1T6 521 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 CERS3Q8IU89 383 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 ESR2Q92731 530 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 PGBD1Q96JS3 809 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 USP28Q96RU2 1077 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 ALG1Q9BT22 464 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 ARMT1Q9H993 441 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 LY9Q9HBG7 655 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 EPB41L4AQ9HCS5 686 aaPredicted RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 RAI14Q9P0K7 980 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
USP28-206ENST00000538224 MINPP1Q9UNW1 487 aa7.71□□□□□ -1.18
USP28-206ENST00000538224 NR1I2O75469 434 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 ADCY5O95622 1261 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 SLC3A2P08195 630 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 CALM1P0DP23 149 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 CALM2P0DP24 149 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 CALM3P0DP25 149 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 FDPSP14324 419 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 IFNAR1P17181 557 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 XBP1P17861 261 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 TERF1P54274 439 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 RPS8P62241 208 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 KIF23Q02241 960 aaPredicted RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 PPARAQ07869 468 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 SSRP1Q08945 709 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms