RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 SAMD9Q5K651 1589 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 SH3BP5O60239 455 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 NEMFO60524 1076 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
LINC00346-201ENST00000538077 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 UAP1Q16222 522 aaPredicted RBP12.62□□□□□ -0.39
LINC00346-201ENST00000538077 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 TRPM2O94759 1503 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PDE8AO60658 829 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 RLBP1P12271 317 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PSMC4P43686 418 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PPARDQ03181 441 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 ADGBQ8N7X0 1667 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 POTEB2H3BUK9 544 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
LINC00346-201ENST00000538077 NCOA5Q9HCD5 579 aaKnown RBP12.62□□□□□ -0.39
LINC00346-201ENST00000538077 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 SKILP12757 684 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
LINC00346-201ENST00000538077 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
LINC00346-201ENST00000538077 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 PPP1R7Q15435 360 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 ARHGAP27Q6ZUM4 889 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 PPIP5K2O43314 1243 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 VAMP4O75379 141 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
LINC00346-201ENST00000538077 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
LINC00346-201ENST00000538077 BICDL2A1A5D9 508 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 RFX1P22670 979 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 STRN3Q13033 797 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 WDR44Q5JSH3 913 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 PLVAPQ9BX97 442 aa12.61□□□□□ -0.39
LINC00346-201ENST00000538077 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 KRT19P08727 400 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 KIF4AO95239 1232 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 MICALCLQ6ZW33 695 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 V9GY48 417 aaPredicted RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 PPP2R5DQ14738 602 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 ATP6V0A2Q9Y487 856 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 TACC1O75410 805 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 CNGA1P29973 690 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 GABPAQ06546 454 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 OTUD7AQ8TE49 926 aaPredicted RBP12.6□□□□□ -0.39
LINC00346-201ENST00000538077 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 ODF2LQ9ULJ1 636 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 PRAG1Q86YV5 1406 aa12.6□□□□□ -0.39
LINC00346-201ENST00000538077 GOLGA6L9A6NEM1 432 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 TRAF5O00463 557 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 SCNN1DP51172 638 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 ZBED4O75132 1171 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 PDE4DQ08499 809 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 IFNKQ9P0W0 207 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 DISP1Q96F81 1524 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CFBP00751 764 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 TRPC3Q13507 836 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
LINC00346-201ENST00000538077 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 SUCLG2Q96I99 432 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
LINC00346-201ENST00000538077 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms