RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 AKAP17AQ02040 695 aaKnown RBP10.11□□□□□ -0.79
UBE3B-208ENST00000538070 SLC51AQ86UW1 340 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 EPB41L4AQ9HCS5 686 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-208ENST00000538070 RCOR1Q9UKL0 485 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 BAZ2BQ9UIF8 2168 aaKnown RBP10.11□□□□□ -0.79
UBE3B-208ENST00000538070 COL18A1P39060 1754 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 KCPQ6ZWJ8 1503 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 WTAPQ15007 396 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF34Q8IZ26 560 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 GNPATO15228 680 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 SSRP1Q08945 709 aaKnown RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 KCNF1Q9H3M0 494 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 BTBD18B2RXH4 712 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 SART3Q15020 963 aaKnown RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 STX1AQ16623 288 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 TPD52L1Q16890 204 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 ANO1Q5XXA6 986 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 NBPF5PQ86XG9 351 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 CELF1Q92879 486 aaKnown RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 MROH5Q6ZUA9 1318 aa10.1□□□□□ -0.79
UBE3B-208ENST00000538070 SIPA1L3O60292 1781 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-208ENST00000538070 TPM2P07951 284 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 KLRK1P26718 216 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF75DP51815 510 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 MRC1P22897 1456 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 EVX2Q03828 476 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 UBE3CQ15386 1083 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 SAFBQ15424 915 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 CAVIN4Q5BKX8 364 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 VGLL2Q8N8G2 317 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 LINC00301Q8NCQ3 95 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 CDC5LQ99459 802 aaKnown RBP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 AATFQ9NY61 560 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 CDHR2Q9BYE9 1310 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 BCL9O00512 1426 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 RIC1Q4ADV7 1423 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 MAGEB6P1A0A0J9YX57 407 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 SH2B2O14492 632 aaPredicted RBP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 CAMTA2O94983 1202 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF202O95125 648 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 KIF23Q02241 960 aaPredicted RBP10.09□□□□□ -0.79
UBE3B-208ENST00000538070 DPCR1Q3MIW9 517 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF652Q9Y2D9 606 aa10.09□□□□□ -0.79
UBE3B-208ENST00000538070 GSG1L2A8MUP6 293 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 ERVV-1B6SEH8 477 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 ZPR1O75312 459 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 NR5A1Q13285 461 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 RTN1Q16799 776 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 AKNAD1Q5T1N1 836 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBE3B-208ENST00000538070 GNL3LQ9NVN8 582 aaKnown RBP10.08□□□□□ -0.8
UBE3B-208ENST00000538070 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 JCADQ9P266 1359 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 CDKL5O76039 1030 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 PFKFB1P16118 471 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 SYKP43405 635 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 CCDC144BQ3MJ40 725 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 RFX7Q2KHR2 1363 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 PNOCQ13519 176 aa10.08□□□□□ -0.8
UBE3B-208ENST00000538070 SNW1Q13573 536 aaKnown RBP10.08□□□□□ -0.8
UBE3B-208ENST00000538070 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-208ENST00000538070 TBC1D9BQ66K14 1250 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 SETDB2Q96T68 719 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 VPS54Q9P1Q0 977 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 TACC3Q9Y6A5 838 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 NMT2O60551 498 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 DIS3L2Q8IYB7 885 aaKnown RBP10.07□□□□□ -0.8
UBE3B-208ENST00000538070 GRAMD1CQ8IYS0 662 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 LINC00116Q8NCU8 138 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 KCNG4Q8TDN1 519 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 LY9Q9HBG7 655 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 CABP5Q9NP86 173 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-208ENST00000538070 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
UBE3B-208ENST00000538070 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 CACTINQ8WUQ7 758 aaKnown RBP10.06□□□□□ -0.8
UBE3B-208ENST00000538070 AGXT2Q9BYV1 514 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 IFNKQ9P0W0 207 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 SPATA31A1Q5TZJ5 1347 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 USP17L21D6R901 530 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 PPARAQ07869 468 aa10.06□□□□□ -0.8
UBE3B-208ENST00000538070 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms