RNA–Protein interactions for RNA: ENST00000537380.1

CIITA-203, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best)

Gene CIITA, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-203ENST00000537380 ECE2O60344 883 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
CIITA-203ENST00000537380 CYP7A1P22680 504 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
CIITA-203ENST00000537380 SCNN1DP51172 638 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 HDLBPQ00341 1268 aaKnown RBP11.22□□□□□ -0.61
CIITA-203ENST00000537380 MECOMQ03112 1051 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
CIITA-203ENST00000537380 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
CIITA-203ENST00000537380 IQSEC3Q9UPP2 1182 aaPredicted RBP11.22□□□□□ -0.61
CIITA-203ENST00000537380 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 FOXP2O15409 715 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 RAD17O75943 681 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 PLCG2P16885 1265 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 PRDX5P30044 214 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 TNIP1Q15025 636 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.61
CIITA-203ENST00000537380 FBXL16Q8N461 479 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 ZNF384Q8TF68 577 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
CIITA-203ENST00000537380 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
CIITA-203ENST00000537380 GAKO14976 1311 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 G3V3G9 751 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 BAG3O95817 575 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 FGAP02671 866 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 CHGBP05060 677 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
CIITA-203ENST00000537380 EPHX2P34913 555 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
CIITA-203ENST00000537380 IMMTQ16891 758 aaKnown RBP11.2□□□□□ -0.62
CIITA-203ENST00000537380 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 MFSD14BQ5SR56 506 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 CCDC129Q6ZRS4 1044 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
CIITA-203ENST00000537380 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
CIITA-203ENST00000537380 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 ATP8A2Q9NTI2 1148 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
CIITA-203ENST00000537380 WDR19Q8NEZ3 1342 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 GSG1L2A8MUP6 293 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 PSMD14O00487 310 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 MBD4O95243 580 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 CYP21A2P08686 494 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 VIL1P09327 827 aaKnown RBP11.19□□□□□ -0.62
CIITA-203ENST00000537380 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 GTF2IP78347 998 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 HTRA3P83110 453 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 SLFNL1Q499Z3 407 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 LDHDQ86WU2 507 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 HSCBQ8IWL3 235 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 DPF2Q92785 391 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 TBC1D2Q9BYX2 928 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 CRNKL1Q9BZJ0 848 aaKnown RBP11.19□□□□□ -0.62
CIITA-203ENST00000537380 KCNQ5Q9NR82 932 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 GPRC5DQ9NZD1 345 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 DAXXQ9UER7 740 aaPredicted RBP11.19□□□□□ -0.62
CIITA-203ENST00000537380 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
CIITA-203ENST00000537380 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
CIITA-203ENST00000537380 EPS15P42566 896 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
CIITA-203ENST00000537380 NEK4P51957 841 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 IFNL3Q8IZI9 196 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 DNAJC5GQ8N7S2 189 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 TTC14Q96N46 770 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
CIITA-203ENST00000537380 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
CIITA-203ENST00000537380 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
CIITA-203ENST00000537380 ZNF213O14771 459 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 BLOC1S2Q6QNY1 142 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
CIITA-203ENST00000537380 ADGRA1Q86SQ6 560 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 LCORLQ8N3X6 602 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 GMLQ99445 158 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 NAPBQ9H115 298 aa11.17□□□□□ -0.62
CIITA-203ENST00000537380 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms