RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 KRT23Q9C075 422 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
UBE3B-207ENST00000537063 FAM217BQ9NTX9 383 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-207ENST00000537063 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 RCAN1P53805 252 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
UBE3B-207ENST00000537063 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 GOLPH3LQ9H4A5 285 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
UBE3B-207ENST00000537063 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-207ENST00000537063 CDKL5O76039 1030 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 KIF23Q02241 960 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 RIOK1Q9BRS2 568 aaKnown RBP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 A0A1W2PQ27 194 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 A0A1W2PQ64 194 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 A0A1W2PQD8 194 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 PRKAB2O43741 272 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 YEATS4O95619 227 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 CDC27P30260 824 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 BICD2Q8TD16 824 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 CELF1Q92879 486 aaKnown RBP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
UBE3B-207ENST00000537063 BAZ2AQ9UIF9 1905 aaKnown RBP10.87□□□□□ -0.67
UBE3B-207ENST00000537063 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 TMED8Q6PL24 325 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-207ENST00000537063 FAM84BQ96KN1 310 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-207ENST00000537063 SLC4A4Q9Y6R1 1079 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 CPLX1O14810 134 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 CTAGE5O15320 804 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 AP5Z1O43299 807 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 ADCY5O95622 1261 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 GYG1P46976 350 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 FOSBP53539 338 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 KCNQ4P56696 695 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 LINC00301Q8NCQ3 95 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 USP21Q9UK80 565 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 KIF28PB7ZC32 967 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 RANBP6O60518 1105 aaKnown RBP10.86□□□□□ -0.67
UBE3B-207ENST00000537063 TM4SF1P30408 202 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 GUCY1B3Q02153 619 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 CAMK4Q16566 473 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 MYSM1Q5VVJ2 828 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 AMIGO3Q86WK7 504 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 ZNF384Q8TF68 577 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
UBE3B-207ENST00000537063 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
UBE3B-207ENST00000537063 WTIPA6NIX2 430 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 ZBTB43O43298 467 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 CAVIN2O95810 425 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 FGRP09769 529 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 MSNP26038 577 aaKnown RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 TMEM67Q5HYA8 995 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 ADALQ6DHV7 355 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 CYP7A1P22680 504 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 SETDB2Q96T68 719 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 INCENPQ9NQS7 918 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 CCNL1Q9UK58 526 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 GNPATO15228 680 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 CAVIN4Q5BKX8 364 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 TDRD7Q8NHU6 1098 aaKnown RBP10.85□□□□□ -0.67
UBE3B-207ENST00000537063 KCNG4Q8TDN1 519 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 PCDHA7Q9UN72 937 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 LRRC37AA6NMS7 1700 aa10.85□□□□□ -0.67
UBE3B-207ENST00000537063 MYH6P13533 1939 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 RPS8P62241 208 aaKnown RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 PPARAQ07869 468 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 FMR1NBQ8N0W7 255 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 RNF41Q9H4P4 317 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 MAGEB6P1A0A0J9YX57 407 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 IGSF3O75054 1194 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 FMNL1O95466 1100 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 TDO2P48775 406 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 MYH2Q9UKX2 1941 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 IFNAR1P17181 557 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 ANO6Q4KMQ2 910 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 SMIM5Q71RC9 77 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 NBPF5PQ86XG9 351 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 MIGA1Q8NAN2 632 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms