RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 HSD3B7Q9H2F3 369 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 PCDHA7Q9UN72 937 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 TFCP2Q12800 502 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 MCTP2Q6DN12 878 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 MMS22LQ6ZRQ5 1243 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 VSTM4Q8IW00 320 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 LMOD1P29536 600 aaPredicted RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 GSCP56915 257 aaPredicted RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 SCRN1Q12765 414 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 RABL6Q3YEC7 729 aaPredicted RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 LRRC31Q6UY01 552 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 CCDC91Q7Z6B0 441 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 DHX58Q96C10 678 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
CHFR-213ENST00000536843 AKAP2Q9Y2D5 859 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 FAN1Q9Y2M0 1017 aa17.91■□□□□ 0.46
CHFR-213ENST00000536843 NDUFA8P51970 172 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 CASP7P55210 303 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
CHFR-213ENST00000536843 MSANTD4Q8NCY6 345 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
CHFR-213ENST00000536843 NEK1Q96PY6 1258 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 L1RE1Q9UN81 338 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 PFKFB2O60825 505 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 UBASH3AP57075 661 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 MCM6Q14566 821 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 FAM71BQ8TC56 605 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 CEP89Q96ST8 783 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 ANKZF1Q9H8Y5 726 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 RTEL1Q9NZ71 1219 aa17.9■□□□□ 0.46
CHFR-213ENST00000536843 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
CHFR-213ENST00000536843 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 ERLIN1O75477 346 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
CHFR-213ENST00000536843 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
CHFR-213ENST00000536843 TNNI3KQ59H18 835 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 Q6ZUG5 572 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 SRGAP1Q7Z6B7 1085 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 ILDR1Q86SU0 546 aaPredicted RBP17.89■□□□□ 0.45
CHFR-213ENST00000536843 FPGT-TNNI3KV9GXZ4 949 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 MYO1BO43795 1136 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 CHMP4BP1P59074 171 aa17.89■□□□□ 0.45
CHFR-213ENST00000536843 TOP1P11387 765 aaKnown RBP17.88■□□□□ 0.45
CHFR-213ENST00000536843 TUBB4BP68371 445 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
CHFR-213ENST00000536843 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 DPF2Q92785 391 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 ROBO1Q9Y6N7 1651 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 N4BP1O75113 896 aaKnown RBP17.88■□□□□ 0.45
CHFR-213ENST00000536843 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 TAF5LO75529 589 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
CHFR-213ENST00000536843 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 COL15A1P39059 1388 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 GLI3P10071 1580 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 STX10O60499 249 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 CUTAO60888 179 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 A1BGP04217 495 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 ATP5JP18859 108 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 ZNF589Q86UQ0 364 aaPredicted RBP17.87■□□□□ 0.45
CHFR-213ENST00000536843 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 A0A087WUV0 522 aaPredicted RBP17.87■□□□□ 0.45
CHFR-213ENST00000536843 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 BIN1O00499 593 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 CTDNEP1O95476 244 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 SERPINC1P01008 464 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 CCDC172P0C7W6 258 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 GPATCH11Q8N954 259 aa17.87■□□□□ 0.45
CHFR-213ENST00000536843 BAG1Q99933 345 aaPredicted RBP17.87■□□□□ 0.45
CHFR-213ENST00000536843 H7C1W4 665 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 FOXO4P98177 505 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
CHFR-213ENST00000536843 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 LINC00301Q8NCQ3 95 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 DBNDD2Q9BQY9 259 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 MED4Q9NPJ6 270 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
CHFR-213ENST00000536843 MYL5Q02045 173 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 CEP112Q8N8E3 955 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 FAM107BQ9H098 131 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
CHFR-213ENST00000536843 ARFGEF2Q9Y6D5 1785 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 AFDNP55196 1824 aaKnown RBP17.85■□□□□ 0.45
CHFR-213ENST00000536843 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms