RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 CALCOCO1Q9P1Z2 691 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 CFAP45Q9UL16 551 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 EYSQ5T1H1 3165 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 POLR2AP24928 1970 aaKnown RBP9.08□□□□□ -0.96
CPSF7-216ENST00000536548 SRGAP3O43295 1099 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 LARGE1O95461 756 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 LIG1P18858 919 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-216ENST00000536548 KRT32Q14532 448 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 NECTIN1Q15223 517 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 TAF7Q15545 349 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-216ENST00000536548 PKN2Q16513 984 aaKnown RBP9.08□□□□□ -0.96
CPSF7-216ENST00000536548 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 ZNF296Q8WUU4 475 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-216ENST00000536548 TSPYL1Q9H0U9 437 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 IL25Q9H293 177 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 SNRKQ9NRH2 765 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 DACT1Q9NYF0 836 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 HDAC9Q9UKV0 1011 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 PAPPA2Q9BXP8 1791 aa9.08□□□□□ -0.96
CPSF7-216ENST00000536548 SHTN1A0MZ66 631 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 CCP110O43303 1012 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 IFIT2P09913 472 aaKnown RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 MTX1Q13505 466 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 TERF2Q15554 542 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 ME3Q16798 604 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 ATL3Q6DD88 541 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 CDC37L1Q7L3B6 337 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 LRRC8AQ8IWT6 810 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 LEO1Q8WVC0 666 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 PSMD1Q99460 953 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 NAT10Q9H0A0 1025 aaKnown RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 IMPACTQ9P2X3 320 aa9.07□□□□□ -0.96
CPSF7-216ENST00000536548 RBM8AQ9Y5S9 174 aaKnown RBP9.07□□□□□ -0.96
CPSF7-216ENST00000536548 A0A087WZG4 1122 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 A0A0U1RQG5 324 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 KLRG2A4D1S0 409 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 BECN2A8MW95 431 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CAMTA2O94983 1202 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CDK11BP21127 795 aaKnown RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 RPS6KB1P23443 525 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 KCNJ6P48051 423 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 GMPSP49915 693 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 TPM4P67936 248 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 LRMPQ12912 555 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CAMK4Q16566 473 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 FBXO46Q6PJ61 603 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CCDC73Q6ZRK6 1079 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 NBPF5PQ86XG9 351 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CKAP2LQ8IYA6 745 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CCDC150Q8NCX0 1101 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CACTINQ8WUQ7 758 aaKnown RBP9.06□□□□□ -0.96
CPSF7-216ENST00000536548 MAP4K1Q92918 833 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 TIGD1Q96MW7 591 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 ANO10Q9NW15 660 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 FAM53CQ9NYF3 392 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 TPCN1Q9ULQ1 816 aa9.06□□□□□ -0.96
CPSF7-216ENST00000536548 UBR2Q8IWV8 1755 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 SLC27A2O14975 620 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 TPM1P09493 284 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 SKILP12757 684 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 PTH1RQ03431 593 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 CXCL9Q07325 125 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 ST3GAL1Q11201 340 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 TSGA10IPQ3SY00 556 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 NECAB1Q8N987 351 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 DNAAF4Q8WXU2 420 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 ZNF396Q96N95 335 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-216ENST00000536548 DNAJC25Q9H1X3 360 aa9.05□□□□□ -0.96
CPSF7-216ENST00000536548 ARGLU1Q9NWB6 273 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-216ENST00000536548 KIAA0100Q14667 2235 aaKnown RBP9.05□□□□□ -0.96
CPSF7-216ENST00000536548 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 H3BQV1 296 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 STARD3NLO95772 234 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 A1BGP04217 495 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 SLC10A3P09131 477 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 CPA1P15085 419 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 EN2P19622 333 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 ALDH1B1P30837 517 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 FGD1P98174 961 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 RESTQ13127 1097 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 IQCB1Q15051 598 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms