RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ANO1Q5XXA6 986 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
LDLR-203ENST00000535915 DHX40Q8IX18 779 aaKnown RBP15.29■□□□□ 0.04
LDLR-203ENST00000535915 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 AK7Q96M32 723 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
LDLR-203ENST00000535915 PHLPP1O60346 1717 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 NAPBQ9H115 298 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 SENP2Q9HC62 589 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 AOPEPQ8N6M6 819 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 PHKBQ93100 1093 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 MRFAP1L1Q96HT8 127 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 INCENPQ9NQS7 918 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 SEC31BQ9NQW1 1179 aa15.28■□□□□ 0.04
LDLR-203ENST00000535915 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
LDLR-203ENST00000535915 ZBTB43O43298 467 aa15.27■□□□□ 0.04
LDLR-203ENST00000535915 MBD4O95243 580 aa15.27■□□□□ 0.04
LDLR-203ENST00000535915 CDC27P30260 824 aa15.27■□□□□ 0.04
LDLR-203ENST00000535915 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
LDLR-203ENST00000535915 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
LDLR-203ENST00000535915 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.04
LDLR-203ENST00000535915 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.04
LDLR-203ENST00000535915 CTDSPL2Q05D32 466 aa15.27■□□□□ 0.03
LDLR-203ENST00000535915 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.03
LDLR-203ENST00000535915 IGDCC4Q8TDY8 1250 aa15.27■□□□□ 0.03
LDLR-203ENST00000535915 ARMT1Q9H993 441 aa15.27■□□□□ 0.03
LDLR-203ENST00000535915 KIAA1468Q9P260 1216 aa15.27■□□□□ 0.03
LDLR-203ENST00000535915 COL16A1Q07092 1604 aaPredicted RBP15.27■□□□□ 0.03
LDLR-203ENST00000535915 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.032e-14■□□□□ 9.4
LDLR-203ENST00000535915 ALX1Q15699 326 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 ARID3AQ99856 593 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
LDLR-203ENST00000535915 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 EPB41L4AQ9HCS5 686 aaPredicted RBP15.26■□□□□ 0.03
LDLR-203ENST00000535915 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 GOLGA8AA7E2F4 631 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
LDLR-203ENST00000535915 KRT40Q6A162 431 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
LDLR-203ENST00000535915 MYL10Q9BUA6 226 aa15.26■□□□□ 0.03
LDLR-203ENST00000535915 ZNF202O95125 648 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
LDLR-203ENST00000535915 TSC1Q92574 1164 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 ZSWIM5Q9P217 1185 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
LDLR-203ENST00000535915 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
LDLR-203ENST00000535915 TRIM29Q14134 588 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
LDLR-203ENST00000535915 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
LDLR-203ENST00000535915 MYH14Q7Z406 1995 aaKnown RBP15.25■□□□□ 0.03
LDLR-203ENST00000535915 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
LDLR-203ENST00000535915 PFKFB1P16118 471 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 CMA1P23946 247 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 SLC39A14Q15043 492 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 DPCR1Q3MIW9 517 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
LDLR-203ENST00000535915 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 ACSBG1Q96GR2 724 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 IGHMBP2P38935 993 aaKnown RBP15.24■□□□□ 0.03
LDLR-203ENST00000535915 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 LRRC8AQ8IWT6 810 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 C16orf45Q96MC5 204 aaPredicted RBP15.24■□□□□ 0.03
LDLR-203ENST00000535915 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 WDHD1O75717 1129 aaPredicted RBP15.24■□□□□ 0.03
LDLR-203ENST00000535915 BCAMP50895 628 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 NTRK3Q16288 839 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 MFSD6Q6ZSS7 791 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
LDLR-203ENST00000535915 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 GSG1L2A8MUP6 293 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 BIN1O00499 593 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
LDLR-203ENST00000535915 PRKAB2O43741 272 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
LDLR-203ENST00000535915 LIFRP42702 1097 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 TDO2P48775 406 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 DDB1Q16531 1140 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
LDLR-203ENST00000535915 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 FILIP1Q7Z7B0 1213 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 KRT23Q9C075 422 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 PARP10Q53GL7 1025 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
LDLR-203ENST00000535915 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
LDLR-203ENST00000535915 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
LDLR-203ENST00000535915 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms