RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MEIS3Q99687 375 aa25.65■■□□□ 1.7
LTBR-205ENST00000535739 EFCC1Q9HA90 598 aa25.65■■□□□ 1.7
LTBR-205ENST00000535739 RPAP1Q9BWH6 1393 aaPredicted RBP25.65■■□□□ 1.7
LTBR-205ENST00000535739 IL15P40933 162 aaPredicted RBP25.64■■□□□ 1.7
LTBR-205ENST00000535739 PHKA1P46020 1223 aa25.64■■□□□ 1.7
LTBR-205ENST00000535739 RARSP54136 660 aaKnown RBP25.64■■□□□ 1.7
LTBR-205ENST00000535739 CDC42EP5Q6NZY7 148 aa25.64■■□□□ 1.7
LTBR-205ENST00000535739 ERO1BQ86YB8 467 aa25.64■■□□□ 1.7
LTBR-205ENST00000535739 ZFYVE28Q9HCC9 887 aa25.64■■□□□ 1.7
LTBR-205ENST00000535739 GNL3LQ9NVN8 582 aaKnown RBP25.64■■□□□ 1.7
LTBR-205ENST00000535739 MYH2Q9UKX2 1941 aa25.64■■□□□ 1.69
LTBR-205ENST00000535739 BRCA2P51587 3418 aa25.64■■□□□ 1.69
LTBR-205ENST00000535739 TCP10Q12799 353 aa25.63■■□□□ 1.69
LTBR-205ENST00000535739 DCAF15Q66K64 600 aa25.63■■□□□ 1.69
LTBR-205ENST00000535739 FAM151AQ8WW52 585 aa25.63■■□□□ 1.69
LTBR-205ENST00000535739 HDAC5Q9UQL6 1122 aa25.63■■□□□ 1.69
LTBR-205ENST00000535739 IRF6O14896 467 aa25.62■■□□□ 1.69
LTBR-205ENST00000535739 LDHBP07195 334 aaKnown RBP25.62■■□□□ 1.69
LTBR-205ENST00000535739 ADORA1P30542 326 aa25.62■■□□□ 1.69
LTBR-205ENST00000535739 ZNF341Q9BYN7 854 aa25.62■■□□□ 1.69
LTBR-205ENST00000535739 COPRSQ9NQ92 184 aa25.62■■□□□ 1.69
LTBR-205ENST00000535739 CETPP11597 493 aa25.61■■□□□ 1.69
LTBR-205ENST00000535739 INPP5BP32019 993 aa25.61■■□□□ 1.69
LTBR-205ENST00000535739 NFIAQ12857 509 aa25.61■■□□□ 1.69
LTBR-205ENST00000535739 DENND2AQ9ULE3 1009 aa25.61■■□□□ 1.69
LTBR-205ENST00000535739 POTEFA5A3E0 1075 aa25.6■■□□□ 1.69
LTBR-205ENST00000535739 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
LTBR-205ENST00000535739 PPIL2Q13356 520 aa25.6■■□□□ 1.69
LTBR-205ENST00000535739 INTS3Q68E01 1043 aaKnown RBP25.6■■□□□ 1.69
LTBR-205ENST00000535739 SALL1Q9NSC2 1324 aa25.6■■□□□ 1.69
LTBR-205ENST00000535739 ZSWIM8A7E2V4 1837 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 BTBD19C9JJ37 291 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 SEMA3EO15041 775 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 SNAPC2Q13487 334 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 PRPF38BQ5VTL8 546 aaKnown RBP25.59■■□□□ 1.69
LTBR-205ENST00000535739 CCDC102BQ68D86 513 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 USP40Q9NVE5 1235 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 FAM198AQ9UFP1 575 aa25.59■■□□□ 1.69
LTBR-205ENST00000535739 TIMM10P62072 90 aa25.58■■□□□ 1.69
LTBR-205ENST00000535739 RBBP6Q7Z6E9 1792 aaKnown RBP25.58■■□□□ 1.69
LTBR-205ENST00000535739 PPATQ06203 517 aa25.57■■□□□ 1.68
LTBR-205ENST00000535739 ARHGAP45Q92619 1136 aa25.57■■□□□ 1.68
LTBR-205ENST00000535739 ARMC5Q96C12 935 aa25.57■■□□□ 1.68
LTBR-205ENST00000535739 ZNF112Q9UJU3 913 aa25.57■■□□□ 1.68
LTBR-205ENST00000535739 ZFPM1Q8IX07 1006 aa25.56■■□□□ 1.68
LTBR-205ENST00000535739 SRGAP3O43295 1099 aa25.55■■□□□ 1.68
LTBR-205ENST00000535739 TLR2O60603 784 aa25.55■■□□□ 1.68
LTBR-205ENST00000535739 WDHD1O75717 1129 aaPredicted RBP25.55■■□□□ 1.68
LTBR-205ENST00000535739 GNAI3P08754 354 aa25.55■■□□□ 1.68
LTBR-205ENST00000535739 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
LTBR-205ENST00000535739 ZCCHC17Q9NP64 241 aaKnown RBP25.55■■□□□ 1.68
LTBR-205ENST00000535739 DOCK2Q92608 1830 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 TFCP2Q12800 502 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 RASGRF1Q13972 1273 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 ARHGEF6Q15052 776 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 ZGPATQ8N5A5 531 aaKnown RBP25.54■■□□□ 1.68
LTBR-205ENST00000535739 ARHGAP39Q9C0H5 1083 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 PTCH2Q9Y6C5 1203 aa25.54■■□□□ 1.68
LTBR-205ENST00000535739 A0A1B0GUL7 405 aa25.53■■□□□ 1.68
LTBR-205ENST00000535739 ZBTB22O15209 634 aa25.53■■□□□ 1.68
LTBR-205ENST00000535739 ABCF2Q9UG63 623 aa25.53■■□□□ 1.68
LTBR-205ENST00000535739 TNNQ9UQP3 1299 aa25.53■■□□□ 1.68
LTBR-205ENST00000535739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.53■■□□□ 1.68
LTBR-205ENST00000535739 RGS3P49796 1198 aa25.52■■□□□ 1.68
LTBR-205ENST00000535739 MTX1Q13505 466 aa25.52■■□□□ 1.68
LTBR-205ENST00000535739 XAGE2Q96GT9 111 aa25.52■■□□□ 1.68
LTBR-205ENST00000535739 GAKO14976 1311 aa25.52■■□□□ 1.68
LTBR-205ENST00000535739 LACTBP83111 547 aaPredicted RBP25.51■■□□□ 1.67
LTBR-205ENST00000535739 NOL9Q5SY16 702 aaKnown RBP25.51■■□□□ 1.67
LTBR-205ENST00000535739 DZIP1Q86YF9 867 aaKnown RBP25.51■■□□□ 1.67
LTBR-205ENST00000535739 IDI2Q9BXS1 227 aa25.51■■□□□ 1.67
LTBR-205ENST00000535739 KCNH4Q9UQ05 1017 aa25.51■■□□□ 1.67
LTBR-205ENST00000535739 AKAP2Q9Y2D5 859 aa25.51■■□□□ 1.67
LTBR-205ENST00000535739 BCAR3O75815 825 aa25.5■■□□□ 1.67
LTBR-205ENST00000535739 TRIM27P14373 513 aa25.5■■□□□ 1.67
LTBR-205ENST00000535739 EN2P19622 333 aaPredicted RBP25.5■■□□□ 1.67
LTBR-205ENST00000535739 KIF22Q14807 665 aa25.5■■□□□ 1.67
LTBR-205ENST00000535739 PDS5AQ29RF7 1337 aaKnown RBP25.5■■□□□ 1.67
LTBR-205ENST00000535739 SLC9C1Q4G0N8 1177 aa25.5■■□□□ 1.67
LTBR-205ENST00000535739 ZNF333Q96JL9 665 aa25.5■■□□□ 1.67
LTBR-205ENST00000535739 ATRNL1Q5VV63 1379 aa25.49■■□□□ 1.67
LTBR-205ENST00000535739 IPO8O15397 1037 aaKnown RBP25.49■■□□□ 1.67
LTBR-205ENST00000535739 ENTPD3O75355 529 aa25.49■■□□□ 1.67
LTBR-205ENST00000535739 ECM2O94769 699 aaPredicted RBP25.49■■□□□ 1.67
LTBR-205ENST00000535739 ANKRD23Q86SG2 305 aa25.49■■□□□ 1.67
LTBR-205ENST00000535739 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
LTBR-205ENST00000535739 NEUROD6Q96NK8 337 aa25.49■■□□□ 1.67
LTBR-205ENST00000535739 CPA4Q9UI42 421 aa25.49■■□□□ 1.67
LTBR-205ENST00000535739 RFX7Q2KHR2 1363 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 PDHXO00330 501 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 MOGSQ13724 837 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 MVPQ14764 893 aaKnown RBP25.48■■□□□ 1.67
LTBR-205ENST00000535739 SPTY2D1Q68D10 685 aaPredicted RBP25.48■■□□□ 1.67
LTBR-205ENST00000535739 C17orf99Q6UX52 265 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 ATF7IPQ6VMQ6 1270 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 SH3BP5LQ7L8J4 393 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 NBPF11Q86T75 865 aa25.48■■□□□ 1.67
LTBR-205ENST00000535739 FAM163AQ96GL9 167 aaPredicted RBP25.48■■□□□ 1.67
LTBR-205ENST00000535739 PHF20L1A8MW92 1017 aa25.47■■□□□ 1.67
LTBR-205ENST00000535739 BTDP43251 543 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms