RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PBRM1Q86U86 1689 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 SOX1O00570 391 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-202ENST00000535689 TRPA1O75762 1119 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 CTSHP09668 335 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 NID1P14543 1247 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 LIG3P49916 1009 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 SNRPNP63162 240 aaKnown RBP5.08□□□□□ -1.6
SNHG1-202ENST00000535689 LMNB2Q03252 620 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 SULF2Q8IWU5 870 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 ZNF428Q96B54 188 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 YIPF2Q9BWQ6 316 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 CEP41Q9BYV8 373 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
SNHG1-202ENST00000535689 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-202ENST00000535689 METTL12A8MUP2 240 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 GSTP1P09211 210 aaKnown RBP5.07□□□□□ -1.6
SNHG1-202ENST00000535689 ACPPP15309 386 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 EPHA1P21709 976 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 PDE3AQ14432 1141 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 GRIK5Q16478 980 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 DUOXA2Q1HG44 320 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 EXOSC6Q5RKV6 272 aaKnown RBP5.07□□□□□ -1.6
SNHG1-202ENST00000535689 SNAP47Q5SQN1 464 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 MEI1Q5TIA1 1274 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 PCNX4Q63HM2 1172 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 AGMOQ6ZNB7 445 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 KIAA0825Q8IV33 1275 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 FMR1NBQ8N0W7 255 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-202ENST00000535689 ACSBG1Q96GR2 724 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 PLVAPQ9BX97 442 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 RNF208Q9H0X6 261 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 SH2B1Q9NRF2 756 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-202ENST00000535689 TACC3Q9Y6A5 838 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 SNCAIPQ9Y6H5 919 aa5.07□□□□□ -1.6
SNHG1-202ENST00000535689 IMPDH2P12268 514 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 EIF4A3P38919 411 aaKnown RBP5.06□□□□□ -1.6
SNHG1-202ENST00000535689 RASSF7Q02833 373 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 PDE4BQ07343 736 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 KCNMA1Q12791 1236 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 ZNF423Q2M1K9 1284 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 CWF19L2Q2TBE0 894 aaKnown RBP5.06□□□□□ -1.6
SNHG1-202ENST00000535689 ERMP1Q7Z2K6 904 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 HDXQ7Z353 690 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 TRIM42Q8IWZ5 723 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 SLC43A3Q8NBI5 491 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 KCT2Q8NC54 265 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 KCNB2Q92953 911 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 HHIPQ96QV1 700 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 SPON2Q9BUD6 331 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 STRIP2Q9ULQ0 834 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 INPP5FQ9Y2H2 1132 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 FGD5Q6ZNL6 1462 aa5.06□□□□□ -1.6
SNHG1-202ENST00000535689 CEP170Q5SW79 1584 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 A0A0A0MRY4 1105 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 MEGF11A6BM72 1044 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 ENC1O14682 589 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-202ENST00000535689 CDC25BP30305 580 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 HDLBPQ00341 1268 aaKnown RBP5.05□□□□□ -1.6
SNHG1-202ENST00000535689 SETDB1Q15047 1291 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 SOGA3Q5TF21 947 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 NUTM2GQ5VZR2 741 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 TMEM130Q8N3G9 435 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 NT5C1AQ9BXI3 368 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 IGSF5Q9NSI5 407 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 DDX41Q9UJV9 622 aaKnown RBP5.05□□□□□ -1.6
SNHG1-202ENST00000535689 MAPKBP1O60336 1514 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 GRIN2AQ12879 1464 aa5.05□□□□□ -1.6
SNHG1-202ENST00000535689 SART1O43290 800 aaKnown RBP5.04□□□□□ -1.6
SNHG1-202ENST00000535689 BAG6P46379 1132 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 ZNF165P49910 485 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 CAMK2GQ13555 558 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-202ENST00000535689 MPP2Q14168 576 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 LRRFIP1Q32MZ4 808 aaKnown RBP5.04□□□□□ -1.6
SNHG1-202ENST00000535689 ANKRD34AQ69YU3 496 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 FDX2Q6P4F2 183 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 GIMAP7Q8NHV1 300 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 KLHDC7BQ96G42 594 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 SEC16BQ96JE7 1060 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 RUSC1Q9BVN2 902 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 USP26Q9BXU7 913 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 ATXN3LQ9H3M9 355 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 PICK1Q9NRD5 415 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 KBTBD4Q9NVX7 518 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 USP21Q9UK80 565 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 PRG4Q92954 1404 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-202ENST00000535689 TOP2BQ02880 1626 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 SHROOM2Q13796 1616 aa5.04□□□□□ -1.6
SNHG1-202ENST00000535689 MINDY4BA8MYZ0 360 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 DLL1O00548 723 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 GDF11O95390 407 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 BMP6P22004 513 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 MAOBP27338 520 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 ZNF157P51786 506 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-202ENST00000535689 ARID5AQ03989 594 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 FAAP100Q0VG06 881 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 LINC00114Q6XXX2 140 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 FAM9AQ8IZU1 332 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-202ENST00000535689 TMEM151AQ8N4L1 468 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 PHC3Q8NDX5 983 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms