RNA–Protein interactions for RNA: ENST00000535645.1

C2CD3-208, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-208ENST00000535645 SLFNL1Q499Z3 407 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 EAPPQ56P03 285 aaPredicted RBP8.71□□□□□ -1.02
C2CD3-208ENST00000535645 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 TEX11Q8IYF3 940 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 L3MBTL3Q96JM7 780 aaPredicted RBP8.71□□□□□ -1.02
C2CD3-208ENST00000535645 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 PUS7LQ9H0K6 701 aaKnown RBP8.71□□□□□ -1.02
C2CD3-208ENST00000535645 ARMT1Q9H993 441 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 VEZTQ9HBM0 779 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 CLEC11AQ9Y240 323 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 GAKO14976 1311 aa8.71□□□□□ -1.02
C2CD3-208ENST00000535645 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 SHTN1A0MZ66 631 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 SPDYE2BA6NHP3 402 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 REC8O95072 547 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 CHGBP05060 677 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 SPDYE6P0CI01 402 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 TNNI2P48788 182 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 PPP4CP60510 307 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 USP50Q70EL3 339 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-208ENST00000535645 PNMA8AQ86V59 439 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-208ENST00000535645 AMOTL1Q8IY63 956 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 ZNF384Q8TF68 577 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 PRMT6Q96LA8 375 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-208ENST00000535645 SEC62Q99442 399 aaKnown RBP8.7□□□□□ -1.02
C2CD3-208ENST00000535645 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 TDRD3Q9H7E2 651 aaKnown RBP8.7□□□□□ -1.02
C2CD3-208ENST00000535645 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 CCDC171Q6TFL3 1326 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 RAD50Q92878 1312 aa8.7□□□□□ -1.02
C2CD3-208ENST00000535645 DOCK2Q92608 1830 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 CLRN2A0PK11 232 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 M0R2C6 588 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 WNT10BO00744 389 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 SGSM2O43147 1006 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TDO2P48775 406 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 PICALMQ13492 652 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 APOBEC3HQ6NTF7 200 aaKnown RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 CDC42EP5Q6NZY7 148 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 CCDC129Q6ZRS4 1044 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 ADGRA1Q86SQ6 560 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 LCORLQ8N3X6 602 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TRPM4Q8TD43 1214 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 SH3RF3Q8TEJ3 882 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TGFBRAP1Q8WUH2 860 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 DCPSQ96C86 337 aaKnown RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 STRBPQ96SI9 672 aaKnown RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TAF1DQ9H5J8 278 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 UPF2Q9HAU5 1272 aaKnown RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 GPBP1L1Q9HC44 474 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
C2CD3-208ENST00000535645 ZNF70Q9UC06 446 aaPredicted RBP8.69□□□□□ -1.02
C2CD3-208ENST00000535645 TCP10L2B9ZVM9 353 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 ZNF589Q86UQ0 364 aaPredicted RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 APOBEC3FQ8IUX4 373 aaKnown RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 MAPKAPK5Q8IW41 473 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 ZSCAN29Q8IWY8 852 aaPredicted RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 RIOK1Q9BRS2 568 aaKnown RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 NAPBQ9H115 298 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 ATP8A2Q9NTI2 1148 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 CTNNA3Q9UI47 895 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 PCDHAC2Q9Y5I4 1007 aa8.68□□□□□ -1.02
C2CD3-208ENST00000535645 RPAP1Q9BWH6 1393 aaPredicted RBP8.68□□□□□ -1.02
C2CD3-208ENST00000535645 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 PRKAB2O43741 272 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 HLA-DOAP06340 250 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 HSPD1P10809 573 aaKnown RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 MCCP23508 829 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 CACNB3P54284 484 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 RHBDL3P58872 404 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 TCP10Q12799 353 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 MAST2Q6P0Q8 1798 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 SDR42E1Q8WUS8 393 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 TRIM34Q9BYJ4 488 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 NMRK2Q9NPI5 230 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 GGA3Q9NZ52 723 aa8.67□□□□□ -1.02
C2CD3-208ENST00000535645 U3KPZ7 1027 aaPredicted RBP8.67□□□□□ -1.02
C2CD3-208ENST00000535645 SCN4AP35499 1836 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 MINDY4BA8MYZ0 360 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 ENTPD3O75355 529 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 EGFRP00533 1210 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
C2CD3-208ENST00000535645 HIRAP54198 1017 aaPredicted RBP8.66□□□□□ -1.02
C2CD3-208ENST00000535645 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
C2CD3-208ENST00000535645 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms