RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 IL15P40933 162 aaPredicted RBP16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 AFMP43652 599 aa16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 PHKA1P46020 1223 aa16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 FMR1Q06787 632 aaKnown RBP eCLIP16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 KRT222Q8N1A0 295 aa16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 LLPHQ9BRT6 129 aaKnown RBP16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 LZTFL1Q9NQ48 299 aa16.06■□□□□ 0.16
LPCAT3-203ENST00000535479 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 PRDM1O75626 825 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 INTS13Q9NVM9 706 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 ASAP1Q9ULH1 1129 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 CDC25BP30305 580 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 TERF2Q15554 542 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 CNNM3Q8NE01 707 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
LPCAT3-203ENST00000535479 ABL1P00519 1130 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 NLRP12P59046 1061 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 GNG11P61952 73 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 EVX2Q03828 476 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 MNS1Q8NEH6 495 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 NCOA7Q8NI08 942 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 ERO1AQ96HE7 468 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.16
LPCAT3-203ENST00000535479 POLR2DO15514 142 aaKnown RBP16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 ST5P78524 1137 aa16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 FEZ1Q99689 392 aa16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 MAPK8IP1Q9UQF2 711 aa16.03■□□□□ 0.16
LPCAT3-203ENST00000535479 TRDNQ13061 729 aa16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 TFR2Q9UP52 801 aa16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 MORC2Q9Y6X9 1032 aaPredicted RBP16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 N4BP2Q86UW6 1770 aaPredicted RBP16.02■□□□□ 0.16
LPCAT3-203ENST00000535479 CYP2D7A0A087X1C5 515 aa16.02■□□□□ 0.15
LPCAT3-203ENST00000535479 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.15
LPCAT3-203ENST00000535479 TMEM67Q5HYA8 995 aa16.02■□□□□ 0.15
LPCAT3-203ENST00000535479 KCNG4Q8TDN1 519 aa16.02■□□□□ 0.15
LPCAT3-203ENST00000535479 JAG2Q9Y219 1238 aa16.02■□□□□ 0.15
LPCAT3-203ENST00000535479 UBXN4Q92575 508 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 TEX33O43247 280 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 ITGA6P23229 1130 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 CDC25AP30304 524 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 IFIT5Q13325 482 aaKnown RBP16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 FHOD1Q9Y613 1164 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 WNT7AO00755 349 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 SASH3O75995 380 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 EVCP57679 992 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 APOA5Q6Q788 366 aa16.01■□□□□ 0.15
LPCAT3-203ENST00000535479 AFDNP55196 1824 aaKnown RBP16■□□□□ 0.15
LPCAT3-203ENST00000535479 NCAPD2Q15021 1401 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 PLA2G4AP47712 749 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 PRDM11Q9NQV5 511 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 KIF13AQ9H1H9 1805 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 ADGRL3Q9HAR2 1447 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 MINDY4BA8MYZ0 360 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 PNMA6AP0CW24 399 aaPredicted RBP16■□□□□ 0.15
LPCAT3-203ENST00000535479 IARSP41252 1262 aaKnown RBP16■□□□□ 0.15
LPCAT3-203ENST00000535479 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
LPCAT3-203ENST00000535479 SLC39A14Q15043 492 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 KCTD19Q17RG1 926 aaPredicted RBP15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 DHX58Q96C10 678 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 NOL10Q9BSC4 688 aaKnown RBP15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 POLR3EQ9NVU0 708 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 LMO7Q8WWI1 1683 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 UBN2Q6ZU65 1347 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 MBD4O95243 580 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 GSDMDP57764 484 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 SLIT1O75093 1534 aa15.99■□□□□ 0.15
LPCAT3-203ENST00000535479 VWA3AA6NCI4 1184 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms