RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 MAP3K2Q9Y2U5 619 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 ALPK3Q96L96 1907 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-206ENST00000535290 CWF19L2Q2TBE0 894 aaKnown RBP10.67□□□□□ -0.7
CLIP1-206ENST00000535290 MFSD14BQ5SR56 506 aa10.67□□□□□ -0.7
CLIP1-206ENST00000535290 GPAT2Q6NUI2 795 aa10.67□□□□□ -0.7
CLIP1-206ENST00000535290 UBE3BQ7Z3V4 1068 aa10.67□□□□□ -0.7
CLIP1-206ENST00000535290 PARK7Q99497 189 aaKnown RBP10.67□□□□□ -0.7
CLIP1-206ENST00000535290 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
CLIP1-206ENST00000535290 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 ECM29Q5VYK3 1845 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 H7C1W4 665 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 CRKP46108 304 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-206ENST00000535290 IRF5Q13568 498 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 GRIK5Q16478 980 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 ANKLE1Q8NAG6 615 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 MAFAQ8NHW3 353 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-206ENST00000535290 CDX2Q99626 313 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-206ENST00000535290 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLIP1-206ENST00000535290 MBIPQ9NS73 344 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
CLIP1-206ENST00000535290 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.7
CLIP1-206ENST00000535290 CSF1RP07333 972 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-206ENST00000535290 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
CLIP1-206ENST00000535290 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
CLIP1-206ENST00000535290 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
CLIP1-206ENST00000535290 TNPO2O14787 897 aaKnown RBP10.64□□□□□ -0.71
CLIP1-206ENST00000535290 KSR2Q6VAB6 950 aa10.64□□□□□ -0.71
CLIP1-206ENST00000535290 TDRD7Q8NHU6 1098 aaKnown RBP10.64□□□□□ -0.71
CLIP1-206ENST00000535290 PFASO15067 1338 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 PLA2G5P39877 138 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 CASP7P55210 303 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 TRIM32Q13049 653 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-206ENST00000535290 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 SYMPKQ92797 1274 aaKnown RBP10.63□□□□□ -0.71
CLIP1-206ENST00000535290 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
CLIP1-206ENST00000535290 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 PLIN1O60240 522 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 GYG1P46976 350 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 NEXNQ0ZGT2 675 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 C8orf58Q8NAV2 365 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
CLIP1-206ENST00000535290 COL2A1P02458 1487 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-206ENST00000535290 TNFRSF10AO00220 468 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 CXCL11O14625 94 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 GCKRQ14397 625 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 APOBEC3HQ6NTF7 200 aaKnown RBP10.61□□□□□ -0.71
CLIP1-206ENST00000535290 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 FAM84BQ96KN1 310 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-206ENST00000535290 OGDHLQ9ULD0 1010 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
CLIP1-206ENST00000535290 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 HMGCRP04035 888 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 HIBADHP31937 336 aaKnown RBP10.6□□□□□ -0.71
CLIP1-206ENST00000535290 HDLBPQ00341 1268 aaKnown RBP10.6□□□□□ -0.71
CLIP1-206ENST00000535290 LRRC26Q2I0M4 334 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
CLIP1-206ENST00000535290 FKBP1CQ5VVH2 108 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 TEKT1Q969V4 418 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 COA7Q96BR5 231 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 FAM122AQ96E09 287 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 ZDHHC15Q96MV8 337 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-206ENST00000535290 TMOD2Q9NZR1 351 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 EYSQ5T1H1 3165 aa10.6□□□□□ -0.71
CLIP1-206ENST00000535290 A0A0G2JLL6 359 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 COL6A1P12109 1028 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 IFIT5Q13325 482 aaKnown RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 FASTKD5Q7L8L6 764 aaKnown RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 PRRT2Q7Z6L0 340 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 SMCR8Q8TEV9 937 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 ZNF594Q96JF6 807 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 TTYH1Q9H313 450 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 GJD2Q9UKL4 321 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-206ENST00000535290 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 NCOR1O75376 2440 aa10.59□□□□□ -0.71
CLIP1-206ENST00000535290 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
CLIP1-206ENST00000535290 TMEM265A0A087WTH1 108 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 FOXO4P98177 505 aa10.58□□□□□ -0.72
CLIP1-206ENST00000535290 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
CLIP1-206ENST00000535290 TJAP1Q5JTD0 557 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms