RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
MCF2L-232ENST00000535094 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-232ENST00000535094 WDR24Q96S15 920 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 ST5P78524 1137 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 PDIA6Q15084 440 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 FILIP1LQ4L180 1135 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 RAI14Q9P0K7 980 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 CEMIPQ8WUJ3 1361 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 CCT6AP40227 531 aaKnown RBP18.21■□□□□ 0.51
MCF2L-232ENST00000535094 HINFPQ9BQA5 517 aa18.21■□□□□ 0.51
MCF2L-232ENST00000535094 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-232ENST00000535094 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-232ENST00000535094 TOM1L2Q6ZVM7 507 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 GDAP1L1Q96MZ0 367 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 CWC15Q9P013 229 aaKnown RBP18.2■□□□□ 0.5
MCF2L-232ENST00000535094 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 BTBD18B2RXH4 712 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
MCF2L-232ENST00000535094 GOLGA1Q92805 767 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 CAPN2P17655 700 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
MCF2L-232ENST00000535094 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
MCF2L-232ENST00000535094 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 TOGARAM2Q6ZUX3 1019 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 SRRTQ9BXP5 876 aaKnown RBP18.19■□□□□ 0.5
MCF2L-232ENST00000535094 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-232ENST00000535094 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 SERTAD1Q9UHV2 236 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
MCF2L-232ENST00000535094 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 PTPRUQ92729 1446 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 TSR1Q2NL82 804 aaKnown RBP18.19■□□□□ 0.5
MCF2L-232ENST00000535094 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
MCF2L-232ENST00000535094 MTF1Q14872 753 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 SLC39A14Q15043 492 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-232ENST00000535094 SAMSN1Q9NSI8 373 aaKnown RBP18.18■□□□□ 0.5
MCF2L-232ENST00000535094 ANKRD65E5RJM6 399 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 CCDC175P0C221 793 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 CASP1P29466 404 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 ARHGEF25Q86VW2 580 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 TXLNBQ8N3L3 684 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 KRI1Q8N9T8 703 aaKnown RBP18.18■□□□□ 0.5
MCF2L-232ENST00000535094 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 PARD6BQ9BYG5 372 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 DACH1Q9UI36 760 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 SCARF1Q14162 830 aa18.18■□□□□ 0.5
MCF2L-232ENST00000535094 SMYD4Q8IYR2 804 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-232ENST00000535094 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
MCF2L-232ENST00000535094 ZSCAN26Q16670 478 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 CABP5Q9NP86 173 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 FHOD1Q9Y613 1164 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 PEAK1Q9H792 1746 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 MROH7-TTC4A0A0A0MT08 1334 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 EFCAB8A8MWE9 144 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 PLA2G4AP47712 749 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 GPIHBP1Q8IV16 184 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 DIS3L2Q8IYB7 885 aaKnown RBP18.17■□□□□ 0.5
MCF2L-232ENST00000535094 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 ERLIN1O75477 346 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 ATF3P18847 181 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 EVA1CP58658 441 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 CHMP4BP1P59074 171 aa18.17■□□□□ 0.5
MCF2L-232ENST00000535094 SPECC1LQ69YQ0 1117 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 IGSF22Q8N9C0 903 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 APPBP2Q92624 585 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 ABCF2Q9UG63 623 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 RSPH14Q9UHP6 348 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 SOWAHDA6NJG2 315 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 N4BP3O15049 544 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-232ENST00000535094 KLHL34Q8N239 644 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 TULP1O00294 542 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-232ENST00000535094 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 AXDND1Q5T1B0 1012 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-232ENST00000535094 SHC4Q6S5L8 630 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 ANKRD20A12PQ8NF67 263 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 SENP2Q9HC62 589 aa18.16■□□□□ 0.5
MCF2L-232ENST00000535094 PHKG2P15735 406 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 POSTNQ15063 836 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 VSTM4Q8IW00 320 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 MIGA1Q8NAN2 632 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 EEF2KMTQ96G04 330 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 UBAC1Q9BSL1 405 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 VPS16Q9H269 839 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 PDE11AQ9HCR9 933 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 SYNE4Q8N205 404 aa18.15■□□□□ 0.5
MCF2L-232ENST00000535094 AKR1B15C9JRZ8 316 aaPredicted RBP18.14■□□□□ 0.5
MCF2L-232ENST00000535094 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.5
MCF2L-232ENST00000535094 PDE4BQ07343 736 aa18.14■□□□□ 0.5
MCF2L-232ENST00000535094 CERS3Q8IU89 383 aa18.14■□□□□ 0.5
MCF2L-232ENST00000535094 CAPZA3Q96KX2 299 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms