RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
RTL1-201ENST00000534062 RUFY3Q7L099 469 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 ADGRA1Q86SQ6 560 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
RTL1-201ENST00000534062 MCM2P49736 904 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 E7EWF7 191 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 BRF1Q92994 677 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 PATL2C9JE40 543 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 BAG3O95817 575 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 LDHCP07864 332 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 Q6ZUG5 572 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 COA1Q9GZY4 146 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
RTL1-201ENST00000534062 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
RTL1-201ENST00000534062 LRP5O75197 1615 aa11.27□□□□□ -0.6
RTL1-201ENST00000534062 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.6
RTL1-201ENST00000534062 GRIK5Q16478 980 aa11.27□□□□□ -0.6
RTL1-201ENST00000534062 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.6
RTL1-201ENST00000534062 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.6
RTL1-201ENST00000534062 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.6
RTL1-201ENST00000534062 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 ZBTB22O15209 634 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 GSTO1P78417 241 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
RTL1-201ENST00000534062 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 GNAT2P19087 354 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 RPS6KB1P23443 525 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 PICALMQ13492 652 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 CCDC93Q567U6 631 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 AMOTL1Q8IY63 956 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 MCM9Q9NXL9 1143 aa11.27□□□□□ -0.61
RTL1-201ENST00000534062 COL1A1P02452 1464 aaPredicted RBP11.26□□□□□ -0.61
RTL1-201ENST00000534062 B4E1Z4 1266 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 PRDM1O75626 825 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 FOSBP53539 338 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 KDM4AO75164 1064 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
RTL1-201ENST00000534062 STOX1Q6ZVD7 989 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
RTL1-201ENST00000534062 ECE2O60344 883 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
RTL1-201ENST00000534062 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 TGFBRAP1Q8WUH2 860 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 SMC3Q9UQE7 1217 aa11.26□□□□□ -0.61
RTL1-201ENST00000534062 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 RAD17O75943 681 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 POLR3DP05423 398 aaPredicted RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 MTERF4Q7Z6M4 381 aaKnown RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 MAPKAPK5Q8IW41 473 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 PPP1R9BQ96SB3 815 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 USP17L21D6R901 530 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 BTDP43251 543 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 PRC1O43663 620 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 TEX11Q8IYF3 940 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
RTL1-201ENST00000534062 MTMR7Q9Y216 660 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
RTL1-201ENST00000534062 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
RTL1-201ENST00000534062 MCM5P33992 734 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 DYNC1I1O14576 645 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 ERICH2A1L162 156 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 KIF20AO95235 890 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 LARGE1O95461 756 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms