RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 DOCK1Q14185 1865 aa22.85■■□□□ 1.25
HIF3A-216ENST00000533789 PDS5AQ29RF7 1337 aaKnown RBP22.85■■□□□ 1.25
HIF3A-216ENST00000533789 ATAD5Q96QE3 1844 aa22.85■■□□□ 1.25
HIF3A-216ENST00000533789 TESPA1A2RU30 521 aaPredicted RBP22.85■■□□□ 1.25
HIF3A-216ENST00000533789 MAP3K9P80192 1104 aa22.85■■□□□ 1.25
HIF3A-216ENST00000533789 MLLT1Q03111 559 aaPredicted RBP22.85■■□□□ 1.25
HIF3A-216ENST00000533789 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
HIF3A-216ENST00000533789 CLUAP1Q96AJ1 413 aa22.85■■□□□ 1.25
HIF3A-216ENST00000533789 FOCADQ5VW36 1801 aa22.85■■□□□ 1.25
HIF3A-216ENST00000533789 GNAI2P04899 355 aa22.84■■□□□ 1.25
HIF3A-216ENST00000533789 OTUD7BQ6GQQ9 843 aa22.84■■□□□ 1.25
HIF3A-216ENST00000533789 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
HIF3A-216ENST00000533789 AKAP2Q9Y2D5 859 aa22.84■■□□□ 1.25
HIF3A-216ENST00000533789 PHIPQ8WWQ0 1821 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 A0A1B0GUL7 405 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 TFCP2Q12800 502 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 RASGRF1Q13972 1273 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 ZKSCAN2Q63HK3 967 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 CNKSR2Q8WXI2 1034 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 MS4A4AQ96JQ5 239 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 HPS5Q9UPZ3 1129 aa22.83■■□□□ 1.25
HIF3A-216ENST00000533789 ZSWIM8A7E2V4 1837 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 HTTP42858 3142 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 DCAF15Q66K64 600 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 CDC42EP5Q6NZY7 148 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 WRNIP1Q96S55 665 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 PTPN18Q99952 460 aa22.82■■□□□ 1.24
HIF3A-216ENST00000533789 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 TIMM10P62072 90 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 CRHR2Q13324 411 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 MVPQ14764 893 aaKnown RBP22.81■■□□□ 1.24
HIF3A-216ENST00000533789 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 OTUD5Q96G74 571 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 XAGE2Q96GT9 111 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 SNCAIPQ9Y6H5 919 aa22.81■■□□□ 1.24
HIF3A-216ENST00000533789 PNMA6EA0A0J9YXQ4 647 aa22.8■■□□□ 1.24
HIF3A-216ENST00000533789 GTF2A2P52657 109 aa22.8■■□□□ 1.24
HIF3A-216ENST00000533789 FBXO46Q6PJ61 603 aaPredicted RBP22.8■■□□□ 1.24
HIF3A-216ENST00000533789 GAKO14976 1311 aa22.8■■□□□ 1.24
HIF3A-216ENST00000533789 MGAMO43451 1857 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 RFX7Q2KHR2 1363 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 SOX10P56693 466 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 NFIAQ12857 509 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 ERO1BQ86YB8 467 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 BRI3BPQ8WY22 251 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 ZNF341Q9BYN7 854 aa22.79■■□□□ 1.24
HIF3A-216ENST00000533789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.79■■□□□ 1.24
HIF3A-216ENST00000533789 CCL15-CCL14A0A0B4J2E2 113 aa22.78■■□□□ 1.24
HIF3A-216ENST00000533789 TCP10Q12799 353 aa22.78■■□□□ 1.24
HIF3A-216ENST00000533789 CCL15Q16663 113 aa22.78■■□□□ 1.24
HIF3A-216ENST00000533789 DZIP1Q86YF9 867 aaKnown RBP22.78■■□□□ 1.24
HIF3A-216ENST00000533789 ZKSCAN4Q969J2 545 aaPredicted RBP22.78■■□□□ 1.24
HIF3A-216ENST00000533789 ERO1AQ96HE7 468 aa22.77■■□□□ 1.24
HIF3A-216ENST00000533789 USP40Q9NVE5 1235 aa22.77■■□□□ 1.24
HIF3A-216ENST00000533789 FAM198AQ9UFP1 575 aa22.77■■□□□ 1.24
HIF3A-216ENST00000533789 ABCF2Q9UG63 623 aa22.77■■□□□ 1.24
HIF3A-216ENST00000533789 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
HIF3A-216ENST00000533789 G3BP1Q13283 466 aaKnown RBP eCLIP22.76■■□□□ 1.23
HIF3A-216ENST00000533789 SPTY2D1Q68D10 685 aaPredicted RBP22.76■■□□□ 1.23
HIF3A-216ENST00000533789 MIGA2Q7L4E1 593 aa22.76■■□□□ 1.23
HIF3A-216ENST00000533789 SLF2Q8IX21 1173 aa22.76■■□□□ 1.23
HIF3A-216ENST00000533789 NEUROD6Q96NK8 337 aa22.76■■□□□ 1.23
HIF3A-216ENST00000533789 CENPFP49454 3210 aa22.76■■□□□ 1.23
HIF3A-216ENST00000533789 KIAA0100Q14667 2235 aaKnown RBP22.76■■□□□ 1.23
HIF3A-216ENST00000533789 PPIL2Q13356 520 aa22.75■■□□□ 1.23
HIF3A-216ENST00000533789 TAF1CQ15572 869 aaPredicted RBP22.75■■□□□ 1.23
HIF3A-216ENST00000533789 FTSJ3Q8IY81 847 aaKnown RBP22.75■■□□□ 1.23
HIF3A-216ENST00000533789 IDI2Q9BXS1 227 aa22.75■■□□□ 1.23
HIF3A-216ENST00000533789 TRIM17Q9Y577 477 aa22.75■■□□□ 1.23
HIF3A-216ENST00000533789 SIPA1L1O43166 1804 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 IRF6O14896 467 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 CETPP11597 493 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 ARID4AP29374 1257 aaPredicted RBP22.74■■□□□ 1.23
HIF3A-216ENST00000533789 INPP5BP32019 993 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 POLA2Q14181 598 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 OTOP1Q7RTM1 612 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 FAM43AQ8N2R8 423 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 ZNF112Q9UJU3 913 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 MROH7-TTC4A0A0A0MT08 1334 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 ATRNL1Q5VV63 1379 aa22.74■■□□□ 1.23
HIF3A-216ENST00000533789 ENTPD3O75355 529 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 RGS3P49796 1198 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 SP3Q02447 781 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 PPATQ06203 517 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 SNAPC2Q13487 334 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 GORABQ5T7V8 394 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 SPATA5Q8NB90 893 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 CD99L2Q8TCZ2 262 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 FAM163AQ96GL9 167 aaPredicted RBP22.73■■□□□ 1.23
HIF3A-216ENST00000533789 HMG20BQ9P0W2 317 aa22.73■■□□□ 1.23
HIF3A-216ENST00000533789 BTDP43251 543 aa22.72■■□□□ 1.23
HIF3A-216ENST00000533789 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
HIF3A-216ENST00000533789 SSH3Q8TE77 659 aa22.72■■□□□ 1.23
HIF3A-216ENST00000533789 ZFYVE28Q9HCC9 887 aa22.72■■□□□ 1.23
HIF3A-216ENST00000533789 ZCCHC17Q9NP64 241 aaKnown RBP22.72■■□□□ 1.23
HIF3A-216ENST00000533789 MYH1P12882 1939 aa22.72■■□□□ 1.23
HIF3A-216ENST00000533789 MECOMQ03112 1051 aa22.71■■□□□ 1.23
HIF3A-216ENST00000533789 NOL9Q5SY16 702 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms