RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 TDO2P48775 406 aa14.02□□□□□ -0.16
CLP1-205ENST00000533682 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.16
CLP1-205ENST00000533682 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.16
CLP1-205ENST00000533682 GNL3LQ9NVN8 582 aaKnown RBP14.02□□□□□ -0.16
CLP1-205ENST00000533682 RGL2O15211 777 aa14.02□□□□□ -0.17
CLP1-205ENST00000533682 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
CLP1-205ENST00000533682 ALX1Q15699 326 aa14.02□□□□□ -0.17
CLP1-205ENST00000533682 PROM2Q8N271 834 aa14.02□□□□□ -0.17
CLP1-205ENST00000533682 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.17
CLP1-205ENST00000533682 UTRNP46939 3433 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 CHD4Q14839 1912 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 CYP2D7A0A087X1C5 515 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 GYS1P13807 737 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 EVX2Q03828 476 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 KRT27Q7Z3Y8 459 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 CNBD1Q8NA66 436 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
CLP1-205ENST00000533682 CARMIL3Q8ND23 1372 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 CACNA1SQ13698 1873 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 LIG1P18858 919 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 LEO1Q8WVC0 666 aaPredicted RBP14.01□□□□□ -0.17
CLP1-205ENST00000533682 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
CLP1-205ENST00000533682 MINDY4BA8MYZ0 360 aa14□□□□□ -0.17
CLP1-205ENST00000533682 UBE2Q2LH0YL09 131 aa14□□□□□ -0.17
CLP1-205ENST00000533682 SH2B2O14492 632 aaPredicted RBP14□□□□□ -0.17
CLP1-205ENST00000533682 PRDX5P30044 214 aa14□□□□□ -0.17
CLP1-205ENST00000533682 CDC27P30260 824 aa14□□□□□ -0.17
CLP1-205ENST00000533682 HIBADHP31937 336 aaKnown RBP14□□□□□ -0.17
CLP1-205ENST00000533682 HMGN5P82970 282 aaKnown RBP14□□□□□ -0.17
CLP1-205ENST00000533682 GIMAP6Q6P9H5 292 aa14□□□□□ -0.17
CLP1-205ENST00000533682 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
CLP1-205ENST00000533682 MICU3Q86XE3 530 aa14□□□□□ -0.17
CLP1-205ENST00000533682 RIOK1Q9BRS2 568 aaKnown RBP14□□□□□ -0.17
CLP1-205ENST00000533682 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
CLP1-205ENST00000533682 PNPLA7Q6ZV29 1317 aa14□□□□□ -0.17
CLP1-205ENST00000533682 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
CLP1-205ENST00000533682 AKNAD1Q5T1N1 836 aa14□□□□□ -0.17
CLP1-205ENST00000533682 PGBD1Q96JS3 809 aa14□□□□□ -0.17
CLP1-205ENST00000533682 LY9Q9HBG7 655 aa14□□□□□ -0.17
CLP1-205ENST00000533682 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 MECOMQ03112 1051 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 CCDC183Q5T5S1 534 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 SYAP1Q96A49 352 aaPredicted RBP13.99□□□□□ -0.17
CLP1-205ENST00000533682 CPLX1O14810 134 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
CLP1-205ENST00000533682 CAMK4Q16566 473 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
CLP1-205ENST00000533682 APOA5Q6Q788 366 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 PHKBQ93100 1093 aa13.99□□□□□ -0.17
CLP1-205ENST00000533682 ORC3Q9UBD5 711 aaPredicted RBP13.99□□□□□ -0.17
CLP1-205ENST00000533682 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
CLP1-205ENST00000533682 NACAP1Q9BZK3 213 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 MYH2Q9UKX2 1941 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 IFIT3O14879 490 aaKnown RBP13.98□□□□□ -0.17
CLP1-205ENST00000533682 SERPINB2P05120 415 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 SLC4A8Q2Y0W8 1093 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 NFXL1Q6ZNB6 911 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 SCAND2PQ9GZW5 306 aaPredicted RBP13.98□□□□□ -0.17
CLP1-205ENST00000533682 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
CLP1-205ENST00000533682 AATFQ9NY61 560 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLP1-205ENST00000533682 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
CLP1-205ENST00000533682 GNAT2P19087 354 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLP1-205ENST00000533682 PPARAQ07869 468 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 GRAPQ13588 217 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 GRIK5Q16478 980 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 GRAPLQ8TC17 118 aaPredicted RBP13.97□□□□□ -0.17
CLP1-205ENST00000533682 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 ZSCAN16Q9H4T2 348 aaPredicted RBP13.97□□□□□ -0.17
CLP1-205ENST00000533682 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
CLP1-205ENST00000533682 WDR19Q8NEZ3 1342 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 IRS2Q9Y4H2 1338 aa13.97□□□□□ -0.17
CLP1-205ENST00000533682 PRDM1O75626 825 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 DDR1Q08345 913 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
CLP1-205ENST00000533682 ELP1O95163 1332 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 ZMYM6O95789 1325 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 TXNRD1Q16881 649 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 C8orf76Q96K31 380 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 DACT1Q9NYF0 836 aa13.96□□□□□ -0.17
CLP1-205ENST00000533682 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 ZBTB43O43298 467 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
CLP1-205ENST00000533682 NR1I2O75469 434 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 TMEM87BQ96K49 555 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 MYH15Q9Y2K3 1946 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 RANBP6O60518 1105 aaKnown RBP13.95□□□□□ -0.18
CLP1-205ENST00000533682 ADRA2BP18089 450 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms