RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CREBRFQ8IUR6 639 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 MAP3K14Q99558 947 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 KRT40Q6A162 431 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 VSTM4Q8IW00 320 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 METAP2P50579 478 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■■■■□ 23.7
CTSB-228ENST00000533455 UBASH3AP57075 661 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 TRDNQ13061 729 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 BMS1Q14692 1282 aaKnown RBP19.17■□□□□ 0.66
CTSB-228ENST00000533455 ELOA2Q8IYF1 753 aaPredicted RBP19.17■□□□□ 0.66
CTSB-228ENST00000533455 LRRN4CLQ8ND94 238 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 DPF2Q92785 391 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 SRRTQ9BXP5 876 aaKnown RBP19.17■□□□□ 0.66
CTSB-228ENST00000533455 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.17■□□□□ 0.662e-6■■□□□ 11.9
CTSB-228ENST00000533455 MAP3K15Q6ZN16 1313 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 TRIM28Q13263 835 aaKnown RBP19.17■□□□□ 0.66
CTSB-228ENST00000533455 TCIRG1Q13488 830 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 HSP90AB3PQ58FF7 597 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 TRIM65Q6PJ69 517 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 AIFM3Q96NN9 605 aa19.17■□□□□ 0.66
CTSB-228ENST00000533455 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.17■□□□□ 0.66
CTSB-228ENST00000533455 SHANK3Q9BYB0 1731 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 CHD4Q14839 1912 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 CUTAO60888 179 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 CSF1RP07333 972 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 ADD2P35612 726 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 DCCP43146 1447 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 CPLX2Q6PUV4 134 aaKnown RBP19.16■□□□□ 0.66
CTSB-228ENST00000533455 CYB5R4Q7L1T6 521 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 TBC1D10CQ8IV04 446 aa19.16■□□□□ 0.66
CTSB-228ENST00000533455 ZNF512BQ96KM6 892 aaPredicted RBP19.16■□□□□ 0.66
CTSB-228ENST00000533455 MYO5AQ9Y4I1 1855 aaKnown RBP19.16■□□□□ 0.66
CTSB-228ENST00000533455 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
CTSB-228ENST00000533455 CLCN6P51797 869 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 HSPA2P54652 639 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 REXO1L1PQ8IX06 675 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 LRP6O75581 1613 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 SERPINC1P01008 464 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 PNOCQ13519 176 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 APOA5Q6Q788 366 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 OLFM4Q6UX06 510 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 METTL16Q86W50 562 aaKnown RBP19.15■□□□□ 0.66
CTSB-228ENST00000533455 CABLES1Q8TDN4 633 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 TMEM87BQ96K49 555 aa19.15■□□□□ 0.66
CTSB-228ENST00000533455 NKX1-1Q15270 411 aaPredicted RBP19.14■□□□□ 0.65
CTSB-228ENST00000533455 ISM2Q6H9L7 571 aa19.14■□□□□ 0.65
CTSB-228ENST00000533455 KRBA2Q6ZNG9 492 aa19.14■□□□□ 0.65
CTSB-228ENST00000533455 DNAI1Q9UI46 699 aa19.14■□□□□ 0.65
CTSB-228ENST00000533455 FHOD1Q9Y613 1164 aa19.14■□□□□ 0.65
CTSB-228ENST00000533455 STK36Q9NRP7 1315 aa19.14■□□□□ 0.65
CTSB-228ENST00000533455 CDC27P30260 824 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 MCAMP43121 646 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 NTRK3Q16288 839 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 PI16Q6UXB8 463 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 TMEM139Q8IV31 216 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
CTSB-228ENST00000533455 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
CTSB-228ENST00000533455 MYH3P11055 1940 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 ZSCAN12O43309 604 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 TOP1P11387 765 aaKnown RBP19.13■□□□□ 0.65
CTSB-228ENST00000533455 IFIT5Q13325 482 aaKnown RBP19.13■□□□□ 0.65
CTSB-228ENST00000533455 UBE3CQ15386 1083 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 ARHGAP29Q52LW3 1261 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 CCDC102BQ68D86 513 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 SGMS1Q86VZ5 419 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 DDX17Q92841 729 aaKnown RBP19.13■□□□□ 0.65
CTSB-228ENST00000533455 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
CTSB-228ENST00000533455 DENND2AQ9ULE3 1009 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 TIAM2Q8IVF5 1701 aa19.13■□□□□ 0.65
CTSB-228ENST00000533455 NPHP1O15259 732 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 ARHGAP6O43182 974 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 TBX2Q13207 712 aaPredicted RBP19.12■□□□□ 0.65
CTSB-228ENST00000533455 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
CTSB-228ENST00000533455 TTF1Q15361 905 aaPredicted RBP19.12■□□□□ 0.65
CTSB-228ENST00000533455 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 NID2Q14112 1375 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 KDM4FA0A1W2PPD8 638 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 TADA3O75528 432 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 ZRANB2O95218 330 aaKnown RBP eCLIP19.12■□□□□ 0.65
CTSB-228ENST00000533455 CLIC6Q96NY7 704 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 FANCLQ9NW38 375 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 ARGLU1Q9NWB6 273 aaPredicted RBP19.12■□□□□ 0.65
CTSB-228ENST00000533455 KCNH3Q9ULD8 1083 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 RIPOR2Q9Y4F9 1068 aa19.12■□□□□ 0.65
CTSB-228ENST00000533455 TMEM232C9JQI7 657 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 FANCGO15287 622 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 ZBTB43O43298 467 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 RANBP6O60518 1105 aaKnown RBP19.11■□□□□ 0.65
CTSB-228ENST00000533455 ATF3P18847 181 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 IARSP41252 1262 aaKnown RBP19.11■□□□□ 0.65
CTSB-228ENST00000533455 TRIM29Q14134 588 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 LONRF3Q496Y0 759 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 FOXP4Q8IVH2 680 aaPredicted RBP19.11■□□□□ 0.65
CTSB-228ENST00000533455 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms