RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 PPP4CP60510 307 aa19.04■□□□□ 0.64
TRIM3-213ENST00000533309 IFNL3Q8IZI9 196 aa19.04■□□□□ 0.64
TRIM3-213ENST00000533309 ZNRF3Q9ULT6 936 aa19.04■□□□□ 0.64
TRIM3-213ENST00000533309 TTF2Q9UNY4 1162 aaKnown RBP19.04■□□□□ 0.64
TRIM3-213ENST00000533309 DDX60LQ5H9U9 1706 aaKnown RBP19.04■□□□□ 0.64
TRIM3-213ENST00000533309 GPR75-ASB3A0A0A6YYF3 556 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 CD2BP2O95400 341 aaKnown RBP19.03■□□□□ 0.64
TRIM3-213ENST00000533309 APPP05067 770 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
TRIM3-213ENST00000533309 SDR42E1Q8WUS8 393 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
TRIM3-213ENST00000533309 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 DAGLAQ9Y4D2 1042 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 RAD17O75943 681 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 STOX1Q6ZVD7 989 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 UPF3BQ9BZI7 483 aaKnown RBP19.03■□□□□ 0.64
TRIM3-213ENST00000533309 TM6SF1Q9BZW5 370 aa19.03■□□□□ 0.64
TRIM3-213ENST00000533309 PSMD14O00487 310 aa19.02■□□□□ 0.64
TRIM3-213ENST00000533309 SOCS7O14512 581 aa19.02■□□□□ 0.64
TRIM3-213ENST00000533309 VIL1P09327 827 aaKnown RBP19.02■□□□□ 0.64
TRIM3-213ENST00000533309 BTDP43251 543 aa19.02■□□□□ 0.64
TRIM3-213ENST00000533309 KIAA0825Q8IV33 1275 aa19.02■□□□□ 0.64
TRIM3-213ENST00000533309 SH3RF3Q8TEJ3 882 aaPredicted RBP19.02■□□□□ 0.64
TRIM3-213ENST00000533309 JAKMIP1Q96N16 626 aaKnown RBP19.02■□□□□ 0.64
TRIM3-213ENST00000533309 NBPF3Q9H094 633 aa19.02■□□□□ 0.64
TRIM3-213ENST00000533309 SCNN1DP51172 638 aa19.01■□□□□ 0.63
TRIM3-213ENST00000533309 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
TRIM3-213ENST00000533309 RSBN1LQ6PCB5 846 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-213ENST00000533309 SNX21Q969T3 373 aa19.01■□□□□ 0.63
TRIM3-213ENST00000533309 GMLQ99445 158 aa19.01■□□□□ 0.63
TRIM3-213ENST00000533309 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
TRIM3-213ENST00000533309 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
TRIM3-213ENST00000533309 NAPBQ9H115 298 aa19.01■□□□□ 0.63
TRIM3-213ENST00000533309 BAG3O95817 575 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 NEK4P51957 841 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 RHBDL3P58872 404 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 HAND2P61296 217 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 CXCL9Q07325 125 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 HHIPL2Q6UWX4 724 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 JDP2Q8WYK2 163 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 NACAP1Q9BZK3 213 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 ZSWIM6Q9HCJ5 1215 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 MYH1P12882 1939 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 CPA1P15085 419 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 YBX3P16989 372 aaKnown RBP eCLIP19■□□□□ 0.63
TRIM3-213ENST00000533309 CASTP20810 708 aaKnown RBP19■□□□□ 0.63
TRIM3-213ENST00000533309 KRT32Q14532 448 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 GIMAP6Q6P9H5 292 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 CERS3Q8IU89 383 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 TEKT1Q969V4 418 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 NOL10Q9BSC4 688 aaKnown RBP19■□□□□ 0.63
TRIM3-213ENST00000533309 MRIQ9BWK5 157 aa19■□□□□ 0.63
TRIM3-213ENST00000533309 DCP1AQ9NPI6 582 aaPredicted RBP19■□□□□ 0.63
TRIM3-213ENST00000533309 E7EWF7 191 aa18.99■□□□□ 0.63
TRIM3-213ENST00000533309 TDO2P48775 406 aa18.99■□□□□ 0.63
TRIM3-213ENST00000533309 HDLBPQ00341 1268 aaKnown RBP18.99■□□□□ 0.63
TRIM3-213ENST00000533309 TTC14Q96N46 770 aa18.99■□□□□ 0.63
TRIM3-213ENST00000533309 MKRN1Q9UHC7 482 aaKnown RBP18.99■□□□□ 0.63
TRIM3-213ENST00000533309 ZNF213O14771 459 aa18.98■□□□□ 0.63
TRIM3-213ENST00000533309 CRKP46108 304 aa18.98■□□□□ 0.63
TRIM3-213ENST00000533309 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
TRIM3-213ENST00000533309 TBC1D10CQ8IV04 446 aa18.98■□□□□ 0.63
TRIM3-213ENST00000533309 ATP8A2Q9NTI2 1148 aa18.98■□□□□ 0.63
TRIM3-213ENST00000533309 ST18O60284 1047 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 PSMA5P28066 241 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 APOBEC3HQ6NTF7 200 aaKnown RBP18.97■□□□□ 0.63
TRIM3-213ENST00000533309 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 ZDHHC15Q96MV8 337 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 NEK1Q96PY6 1258 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 SERPINA10Q9UK55 444 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 PCDHAC2Q9Y5I4 1007 aa18.97■□□□□ 0.63
TRIM3-213ENST00000533309 FZD9O00144 591 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 PLCG2P16885 1265 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 BECN1Q14457 450 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 CIAPIN1Q6FI81 312 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
TRIM3-213ENST00000533309 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 TACC3Q9Y6A5 838 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 SMIM22K7EJ46 135 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 SLC4A3P48751 1232 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 BLOC1S2Q6QNY1 142 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 TEX11Q8IYF3 940 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 ANAPC4Q9UJX5 808 aa18.96■□□□□ 0.63
TRIM3-213ENST00000533309 LMNB1P20700 586 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 RPS6KB1P23443 525 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 CTDSPL2Q05D32 466 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 PPARAQ07869 468 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 IL27Q8NEV9 243 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 TGFBRAP1Q8WUH2 860 aa18.95■□□□□ 0.62
TRIM3-213ENST00000533309 CYP2D7A0A087X1C5 515 aa18.94■□□□□ 0.62
TRIM3-213ENST00000533309 USP17L12C9JPN9 530 aa18.94■□□□□ 0.62
TRIM3-213ENST00000533309 USP17L21D6R901 530 aa18.94■□□□□ 0.62
TRIM3-213ENST00000533309 USP5P45974 858 aa18.94■□□□□ 0.62
TRIM3-213ENST00000533309 EVX2Q03828 476 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms