RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 GRIA4P48058 902 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 SHKBP1Q8TBC3 707 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 HHIPQ96QV1 700 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 CEP44Q9C0F1 390 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 AKAP2Q9Y2D5 859 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 USP17L7P0C7H9 530 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 VAMP1P23763 118 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 PPP2R3AQ06190 1150 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 IKBKEQ14164 716 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 VSIG10LQ86VR7 867 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 KSR1Q8IVT5 923 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 GLIS3Q8NEA6 775 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 BHLHE22Q8NFJ8 381 aaPredicted RBP5.6□□□□□ -1.51
LMO7-223ENST00000533299 MRRFQ96E11 262 aaKnown RBP5.6□□□□□ -1.51
LMO7-223ENST00000533299 CRELD1Q96HD1 420 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 CCDC39Q9UFE4 941 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 SOX13Q9UN79 622 aa5.6□□□□□ -1.51
LMO7-223ENST00000533299 METTL12A8MUP2 240 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 E9PSI1 815 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 SPRED3Q2MJR0 410 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 CLEC10AQ8IUN9 316 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 FAM161BQ96MY7 647 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
LMO7-223ENST00000533299 SH2B1Q9NRF2 756 aaPredicted RBP5.59□□□□□ -1.51
LMO7-223ENST00000533299 TTF2Q9UNY4 1162 aaKnown RBP5.59□□□□□ -1.51
LMO7-223ENST00000533299 HNRNPUQ00839 825 aaKnown RBP eCLIP5.58□□□□□ -1.52
LMO7-223ENST00000533299 PCDH1Q08174 1060 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 KLHL23Q8NBE8 558 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 ZNF576Q9H609 170 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 PIM2Q9P1W9 311 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 SAMM50Q9Y512 469 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 LINC01387J3KSC0 135 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 PAPLNO95428 1278 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 EPHA1P21709 976 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 C19orf57Q0VDD7 668 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 MRPL58Q14197 206 aaKnown RBP5.58□□□□□ -1.52
LMO7-223ENST00000533299 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
LMO7-223ENST00000533299 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.58□□□□□ -1.52
LMO7-223ENST00000533299 TP53INP2Q8IXH6 220 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 AGBL5Q8NDL9 886 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 ANKRD24Q8TF21 1146 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 SLC38A3Q99624 504 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 SOX17Q9H6I2 414 aaPredicted RBP5.58□□□□□ -1.52
LMO7-223ENST00000533299 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
LMO7-223ENST00000533299 GPN3Q9UHW5 284 aaPredicted RBP5.58□□□□□ -1.52
LMO7-223ENST00000533299 HMX2A2RU54 273 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 FSCN2O14926 492 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 ESRRAP11474 423 aaPredicted RBP5.57□□□□□ -1.52
LMO7-223ENST00000533299 CDC25BP30305 580 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 HOXA10P31260 410 aaPredicted RBP5.57□□□□□ -1.52
LMO7-223ENST00000533299 VN1R5Q7Z5H4 357 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 SIAH1Q8IUQ4 282 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 TMEM87AQ8NBN3 555 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 FAM83CQ9BQN1 747 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 RNF19AQ9NV58 838 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 TMEM39AQ9NV64 488 aa5.57□□□□□ -1.52
LMO7-223ENST00000533299 BIN1O00499 593 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 RLBP1P12271 317 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 ST13P50502 369 aaKnown RBP5.56□□□□□ -1.52
LMO7-223ENST00000533299 MSMPQ1L6U9 139 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 TSNAXIP1Q2TAA8 658 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 SV2BQ7L1I2 683 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 C3orf58Q8NDZ4 430 aa5.56□□□□□ -1.52
LMO7-223ENST00000533299 UTP4Q969X6 686 aaKnown RBP5.56□□□□□ -1.52
LMO7-223ENST00000533299 FAM46AQ96IP4 442 aaKnown RBP5.56□□□□□ -1.52
LMO7-223ENST00000533299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.56□□□□□ -1.52
LMO7-223ENST00000533299 B3GALT4O96024 378 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 CYP11A1P05108 521 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
LMO7-223ENST00000533299 HP1BP3Q5SSJ5 553 aaPredicted RBP5.55□□□□□ -1.52
LMO7-223ENST00000533299 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
LMO7-223ENST00000533299 NFXL1Q6ZNB6 911 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.52
LMO7-223ENST00000533299 GIMAP7Q8NHV1 300 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 TOX2Q96NM4 488 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 SOX1O00570 391 aaPredicted RBP5.55□□□□□ -1.52
LMO7-223ENST00000533299 GSTM4Q03013 218 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 AP3B2Q13367 1082 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 TXNDC11Q6PKC3 985 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 EMILIN2Q9BXX0 1053 aa5.55□□□□□ -1.52
LMO7-223ENST00000533299 SCAMP3O14828 347 aaKnown RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 TPTE2Q6XPS3 522 aa5.54□□□□□ -1.52
LMO7-223ENST00000533299 TTLL10Q6ZVT0 673 aa5.54□□□□□ -1.52
LMO7-223ENST00000533299 NPM2Q86SE8 214 aaKnown RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 CILP2Q8IUL8 1156 aa5.54□□□□□ -1.52
LMO7-223ENST00000533299 MYRFLQ96LU7 910 aa5.54□□□□□ -1.52
LMO7-223ENST00000533299 NOC4LQ9BVI4 516 aaKnown RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 BACH2Q9BYV9 841 aa5.54□□□□□ -1.52
LMO7-223ENST00000533299 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
LMO7-223ENST00000533299 UNCXA6NJT0 531 aa5.53□□□□□ -1.52
LMO7-223ENST00000533299 CTSHP09668 335 aa5.53□□□□□ -1.52
LMO7-223ENST00000533299 LMNB1P20700 586 aa5.53□□□□□ -1.52
LMO7-223ENST00000533299 PWP1Q13610 501 aa5.53□□□□□ -1.52
LMO7-223ENST00000533299 ZNF423Q2M1K9 1284 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms