RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CTAGE5O15320 804 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 PRPF4BQ13523 1007 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 NBPF20Q3BBV1 942 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 RAB34Q9BZG1 259 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 PFDN4Q9NQP4 134 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 DIP2BQ9P265 1576 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 IKBKGQ9Y6K9 419 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF213O14771 459 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ATICP31939 592 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CKAP4Q07065 602 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 SPA17Q15506 151 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 FERMT3Q86UX7 667 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 FAM210AQ96ND0 272 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 NUB1Q9Y5A7 615 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 KDM5CP41229 1560 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CCDC194A0A1B0GVG4 234 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 OPHN1O60890 802 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 KCNA4P22459 653 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 HPDP32754 393 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 SSRP1Q08945 709 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 PPP1R7Q15435 360 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 SPATA17Q96L03 361 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF711Q9Y462 761 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 EIF3CLB5ME19 914 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 IFIT3O14879 490 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ZFXP17010 805 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 MAP3K9P80192 1104 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CCDC144CPQ8IYA2 1237 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 PRPF31Q8WWY3 499 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 EIF3CQ99613 913 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CARD6Q9BX69 1037 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 UTP6Q9NYH9 597 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 METP08581 1390 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 DYNC1I2Q13409 638 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ANO6Q4KMQ2 910 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 CATIPQ7Z7H3 387 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 TMEM57Q8N5G2 664 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 ACSBG1Q96GR2 724 aa7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 XAB2Q9HCS7 855 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-210ENST00000533089 A0A087WZG4 1122 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 CTNNA2P26232 953 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 PPARDQ03181 441 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 ARFGAP2Q8N6H7 521 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TMCO5AQ8N6Q1 288 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 IP6K1Q92551 441 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 PPP1R9BQ96SB3 815 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 MPHOSPH6Q99547 160 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 ARHGEF40Q8TER5 1519 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 FAM135BQ49AJ0 1406 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GOLGA8AA7E2F4 631 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GOLGA8BA8MQT2 603 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 STX1AQ16623 288 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TADA2BQ86TJ2 420 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TEX11Q8IYF3 940 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 CDC5LQ99459 802 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TET3O43151 1660 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GSTTP1A0A1W2PQM5 241 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 F8W031 263 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GMNNO75496 209 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 MX1P20591 662 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 RWDD2BP57060 319 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 SKOR1P84550 965 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 MYLK4Q86YV6 388 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 LMTK2Q8IWU2 1503 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 E7EVH7 732 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TXNDC9O14530 226 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 RAB11FIP3O75154 756 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GNGT1P63211 74 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 CCDC152Q4G0S7 254 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GRAMD4Q6IC98 578 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 RPAP2Q8IXW5 612 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 CTAGE9A4FU28 777 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 F6X3S4 739 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 GLRX3O76003 335 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 CLTAP09496 248 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 SCP2P22307 547 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 PCYT1AP49585 367 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF354CQ86Y25 554 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 BICD1Q96G01 975 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 C8orf76Q96K31 380 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 RNF41Q9H4P4 317 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 BTG4Q9NY30 223 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
TGFBR3-210ENST00000533089 TPP2P29144 1249 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 MAP3K7CLP57077 242 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 GJC2Q5T442 439 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 VPS36Q86VN1 386 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 BCAS4Q8TDM0 211 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 SREK1Q8WXA9 508 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 TSC22D4Q9Y3Q8 395 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 DEUP1Q05D60 604 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 SF3A3Q12874 501 aaKnown RBP eCLIP7.81□□□□□ -1.164e-7■■■■■ 31.4
TGFBR3-210ENST00000533089 PPP1R42Q7Z4L9 355 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 SYCP3Q8IZU3 236 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 FAM200AQ8TCP9 573 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms