RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
PCF11-206ENST00000533018 MS4A4AQ96JQ5 239 aa22.1■■□□□ 1.13
PCF11-206ENST00000533018 DAGLAQ9Y4D2 1042 aa22.1■■□□□ 1.13
PCF11-206ENST00000533018 SEMA3EO15041 775 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 BCAR3O75815 825 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 ADORA1P30542 326 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 CCDC102BQ68D86 513 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 CDC42EP5Q6NZY7 148 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 CD99L2Q8TCZ2 262 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 BRI3BPQ8WY22 251 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 USP40Q9NVE5 1235 aa22.09■■□□□ 1.13
PCF11-206ENST00000533018 CENPFP49454 3210 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 TAF1CQ15572 869 aaPredicted RBP22.08■■□□□ 1.13
PCF11-206ENST00000533018 OTOP1Q7RTM1 612 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 FAM151AQ8WW52 585 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 CLUAP1Q96AJ1 413 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 ZNF341Q9BYN7 854 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 SNCAIPQ9Y6H5 919 aa22.08■■□□□ 1.13
PCF11-206ENST00000533018 MYH2Q9UKX2 1941 aa22.08■■□□□ 1.12
PCF11-206ENST00000533018 SPDYE5A6NIY4 337 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 TRIM27P14373 513 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 SP3Q02447 781 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 TFCP2Q12800 502 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 ATF7IPQ6VMQ6 1270 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 ERO1BQ86YB8 467 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 ZGPATQ8N5A5 531 aaKnown RBP22.07■■□□□ 1.12
PCF11-206ENST00000533018 ZFYVE28Q9HCC9 887 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 ABCF2Q9UG63 623 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 AKAP2Q9Y2D5 859 aa22.07■■□□□ 1.12
PCF11-206ENST00000533018 SALL1Q9NSC2 1324 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 A0A1B0GUL7 405 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 WDHD1O75717 1129 aaPredicted RBP22.06■■□□□ 1.12
PCF11-206ENST00000533018 NFIAQ12857 509 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 DZIP1Q86YF9 867 aaKnown RBP22.06■■□□□ 1.12
PCF11-206ENST00000533018 NEUROD6Q96NK8 337 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 EFCC1Q9HA90 598 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 TNNQ9UQP3 1299 aa22.06■■□□□ 1.12
PCF11-206ENST00000533018 RPAP1Q9BWH6 1393 aaPredicted RBP22.06■■□□□ 1.12
PCF11-206ENST00000533018 GNAI2P04899 355 aa22.05■■□□□ 1.12
PCF11-206ENST00000533018 CETPP11597 493 aa22.05■■□□□ 1.12
PCF11-206ENST00000533018 XAGE2Q96GT9 111 aa22.05■■□□□ 1.12
PCF11-206ENST00000533018 HTTP42858 3142 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 IRF6O14896 467 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 SNAPC2Q13487 334 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 RASGRF1Q13972 1273 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 GORABQ5T7V8 394 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 FAM43AQ8N2R8 423 aa22.04■■□□□ 1.12
PCF11-206ENST00000533018 INPP5BP32019 993 aa22.03■■□□□ 1.12
PCF11-206ENST00000533018 MTX1Q13505 466 aa22.03■■□□□ 1.12
PCF11-206ENST00000533018 MVPQ14764 893 aaKnown RBP22.03■■□□□ 1.12
PCF11-206ENST00000533018 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
PCF11-206ENST00000533018 G3BP1Q13283 466 aaKnown RBP eCLIP22.02■■□□□ 1.12
PCF11-206ENST00000533018 PPIL2Q13356 520 aa22.02■■□□□ 1.12
PCF11-206ENST00000533018 SPTY2D1Q68D10 685 aaPredicted RBP22.02■■□□□ 1.12
PCF11-206ENST00000533018 SLF2Q8IX21 1173 aa22.02■■□□□ 1.12
PCF11-206ENST00000533018 FAM198AQ9UFP1 575 aa22.02■■□□□ 1.12
PCF11-206ENST00000533018 PTPN22Q9Y2R2 807 aa22.02■■□□□ 1.12
PCF11-206ENST00000533018 BTBD19C9JJ37 291 aa22.01■■□□□ 1.11
PCF11-206ENST00000533018 PPATQ06203 517 aa22.01■■□□□ 1.11
PCF11-206ENST00000533018 ARHGEF6Q15052 776 aa22.01■■□□□ 1.11
PCF11-206ENST00000533018 ZKSCAN2Q63HK3 967 aa22.01■■□□□ 1.11
PCF11-206ENST00000533018 ZSCAN29Q8IWY8 852 aaPredicted RBP22.01■■□□□ 1.11
PCF11-206ENST00000533018 RGS3P49796 1198 aa22■■□□□ 1.11
PCF11-206ENST00000533018 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
PCF11-206ENST00000533018 ZFPM1Q8IX07 1006 aa22■■□□□ 1.11
PCF11-206ENST00000533018 PNMA6EA0A0J9YXQ4 647 aa21.99■■□□□ 1.11
PCF11-206ENST00000533018 MIER1Q8N108 512 aa21.99■■□□□ 1.11
PCF11-206ENST00000533018 TMEM57Q8N5G2 664 aa21.99■■□□□ 1.11
PCF11-206ENST00000533018 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
PCF11-206ENST00000533018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.99■■□□□ 1.11
PCF11-206ENST00000533018 BTDP43251 543 aa21.98■■□□□ 1.11
PCF11-206ENST00000533018 PICALMQ13492 652 aa21.98■■□□□ 1.11
PCF11-206ENST00000533018 ZNF112Q9UJU3 913 aa21.98■■□□□ 1.11
PCF11-206ENST00000533018 PDS5AQ29RF7 1337 aaKnown RBP21.98■■□□□ 1.11
PCF11-206ENST00000533018 DOCK2Q92608 1830 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 ZBTB22O15209 634 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 TLR2O60603 784 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 CAP1Q01518 475 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 KIF22Q14807 665 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
PCF11-206ENST00000533018 IDI2Q9BXS1 227 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 GAKO14976 1311 aa21.97■■□□□ 1.11
PCF11-206ENST00000533018 ENTPD3O75355 529 aa21.96■■□□□ 1.11
PCF11-206ENST00000533018 ECM2O94769 699 aaPredicted RBP21.96■■□□□ 1.11
PCF11-206ENST00000533018 MECOMQ03112 1051 aa21.96■■□□□ 1.11
PCF11-206ENST00000533018 OS9Q13438 667 aaPredicted RBP21.96■■□□□ 1.11
PCF11-206ENST00000533018 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
PCF11-206ENST00000533018 SPATA5Q8NB90 893 aa21.96■■□□□ 1.11
PCF11-206ENST00000533018 ZCCHC17Q9NP64 241 aaKnown RBP21.96■■□□□ 1.11
PCF11-206ENST00000533018 HMG20BQ9P0W2 317 aa21.96■■□□□ 1.11
PCF11-206ENST00000533018 MROH7-TTC4A0A0A0MT08 1334 aa21.96■■□□□ 1.11
PCF11-206ENST00000533018 KIAA0100Q14667 2235 aaKnown RBP21.96■■□□□ 1.11
PCF11-206ENST00000533018 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
PCF11-206ENST00000533018 TBC1D9Q6ZT07 1266 aa21.95■■□□□ 1.1
PCF11-206ENST00000533018 FAM163AQ96GL9 167 aaPredicted RBP21.95■■□□□ 1.1
PCF11-206ENST00000533018 RAI14Q9P0K7 980 aa21.95■■□□□ 1.1
PCF11-206ENST00000533018 BRCA2P51587 3418 aa21.95■■□□□ 1.1
PCF11-206ENST00000533018 PDHXO00330 501 aa21.94■■□□□ 1.1
PCF11-206ENST00000533018 GSTO1P78417 241 aa21.94■■□□□ 1.1
PCF11-206ENST00000533018 NOL9Q5SY16 702 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms