RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 IRX6P78412 446 aaPredicted RBP24.23■■□□□ 1.47
CPSF1-209ENST00000532725 SUPT20HL1Q3ZLR7 823 aa24.23■■□□□ 1.47
CPSF1-209ENST00000532725 MOB2Q70IA6 237 aa24.23■■□□□ 1.47
CPSF1-209ENST00000532725 FAM83AQ86UY5 434 aa24.23■■□□□ 1.47
CPSF1-209ENST00000532725 TMOD2Q9NZR1 351 aa24.23■■□□□ 1.47
CPSF1-209ENST00000532725 MROH7-TTC4A0A0A0MT08 1334 aa24.23■■□□□ 1.47
CPSF1-209ENST00000532725 GCC1Q96CN9 775 aa24.22■■□□□ 1.47
CPSF1-209ENST00000532725 TMEM39BQ9GZU3 492 aa24.22■■□□□ 1.47
CPSF1-209ENST00000532725 RWDD1Q9H446 243 aaPredicted RBP24.22■■□□□ 1.47
CPSF1-209ENST00000532725 MYH2Q9UKX2 1941 aa24.22■■□□□ 1.47
CPSF1-209ENST00000532725 BTDP43251 543 aa24.21■■□□□ 1.47
CPSF1-209ENST00000532725 CYP4F22Q6NT55 531 aa24.21■■□□□ 1.47
CPSF1-209ENST00000532725 CDAN1Q8IWY9 1227 aa24.21■■□□□ 1.47
CPSF1-209ENST00000532725 WDR33Q9C0J8 1336 aaKnown RBP24.2■■□□□ 1.46
CPSF1-209ENST00000532725 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 IGHDP01880 384 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 RHBDL3P58872 404 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 NFIAQ12857 509 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 NAA16Q6N069 864 aaPredicted RBP24.2■■□□□ 1.46
CPSF1-209ENST00000532725 CAPNS2Q96L46 248 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 BOLA2Q9H3K6 86 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 FAM198AQ9UFP1 575 aa24.2■■□□□ 1.46
CPSF1-209ENST00000532725 TTF1Q15361 905 aaPredicted RBP24.19■■□□□ 1.46
CPSF1-209ENST00000532725 RGMBQ6NW40 437 aa24.19■■□□□ 1.46
CPSF1-209ENST00000532725 FAM151AQ8WW52 585 aa24.19■■□□□ 1.46
CPSF1-209ENST00000532725 IDI2Q9BXS1 227 aa24.19■■□□□ 1.46
CPSF1-209ENST00000532725 ECHDC1Q9NTX5 307 aa24.19■■□□□ 1.46
CPSF1-209ENST00000532725 FZD1Q9UP38 647 aa24.19■■□□□ 1.46
CPSF1-209ENST00000532725 IDH1O75874 414 aaKnown RBP24.18■■□□□ 1.46
CPSF1-209ENST00000532725 ECE1P42892 770 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 PRKG1Q13976 671 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 TTLL12Q14166 644 aaPredicted RBP24.18■■□□□ 1.46
CPSF1-209ENST00000532725 MAP3K11Q16584 847 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 ANKRD45Q5TZF3 282 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 PAXIP1Q6ZW49 1069 aaPredicted RBP24.18■■□□□ 1.46
CPSF1-209ENST00000532725 ADGRA1Q86SQ6 560 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 DNAJC2Q99543 621 aaKnown RBP24.18■■□□□ 1.46
CPSF1-209ENST00000532725 HAUS7Q99871 368 aa24.18■■□□□ 1.46
CPSF1-209ENST00000532725 PCNTO95613 3336 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 SSC5DA1L4H1 1573 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 PPP1R12BO60237 982 aaPredicted RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 USP2O75604 605 aaPredicted RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 WDHD1O75717 1129 aaPredicted RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 MAP4K4O95819 1239 aaPredicted RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 PPP4CP60510 307 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 MAP3K12Q12852 859 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 LDLRAD1Q5T700 205 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 ARMC9Q7Z3E5 817 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 ZFPM1Q8IX07 1006 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 SMC5Q8IY18 1101 aa24.17■■□□□ 1.46
CPSF1-209ENST00000532725 EDC3Q96F86 508 aaKnown RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 ANGEL1Q9UNK9 670 aaKnown RBP24.17■■□□□ 1.46
CPSF1-209ENST00000532725 GOLIM4O00461 696 aa24.16■■□□□ 1.46
CPSF1-209ENST00000532725 ZNF157P51786 506 aaPredicted RBP24.16■■□□□ 1.46
CPSF1-209ENST00000532725 TCP10Q12799 353 aa24.16■■□□□ 1.46
CPSF1-209ENST00000532725 PAPPA2Q9BXP8 1791 aa24.16■■□□□ 1.46
CPSF1-209ENST00000532725 MYO5AQ9Y4I1 1855 aaKnown RBP24.15■■□□□ 1.46
CPSF1-209ENST00000532725 FAM155AB1AL88 458 aaPredicted RBP24.15■■□□□ 1.46
CPSF1-209ENST00000532725 ENTPD3O75355 529 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 CYP7A1P22680 504 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 RGS3P49796 1198 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 TMED8Q6PL24 325 aaPredicted RBP24.15■■□□□ 1.46
CPSF1-209ENST00000532725 MAGEB6Q8N7X4 407 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 OTUD7AQ8TE49 926 aaPredicted RBP24.15■■□□□ 1.46
CPSF1-209ENST00000532725 CCDC102AQ96A19 550 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 PAG1Q9NWQ8 432 aa24.15■■□□□ 1.46
CPSF1-209ENST00000532725 NPM3O75607 178 aaKnown RBP24.14■■□□□ 1.45
CPSF1-209ENST00000532725 BAG3O95817 575 aa24.14■■□□□ 1.45
CPSF1-209ENST00000532725 GRM1Q13255 1194 aa24.14■■□□□ 1.45
CPSF1-209ENST00000532725 DDX4Q9NQI0 724 aaKnown RBP24.14■■□□□ 1.45
CPSF1-209ENST00000532725 AATFQ9NY61 560 aaKnown RBP eCLIP24.14■■□□□ 1.45
CPSF1-209ENST00000532725 RFX7Q2KHR2 1363 aa24.14■■□□□ 1.45
CPSF1-209ENST00000532725 AOC2O75106 756 aa24.13■■□□□ 1.45
CPSF1-209ENST00000532725 MAP2K2P36507 400 aa24.13■■□□□ 1.45
CPSF1-209ENST00000532725 TSHZ3Q63HK5 1081 aa24.13■■□□□ 1.45
CPSF1-209ENST00000532725 GPATCH3Q96I76 525 aa24.13■■□□□ 1.45
CPSF1-209ENST00000532725 RPAP1Q9BWH6 1393 aaPredicted RBP24.13■■□□□ 1.45
CPSF1-209ENST00000532725 UNCXA6NJT0 531 aa24.12■■□□□ 1.45
CPSF1-209ENST00000532725 SLC9C2Q5TAH2 1124 aa24.12■■□□□ 1.45
CPSF1-209ENST00000532725 SH3RF3Q8TEJ3 882 aaPredicted RBP24.12■■□□□ 1.45
CPSF1-209ENST00000532725 NOL10Q9BSC4 688 aaKnown RBP24.12■■□□□ 1.45
CPSF1-209ENST00000532725 ZBTB47Q9UFB7 747 aaPredicted RBP24.12■■□□□ 1.45
CPSF1-209ENST00000532725 TTC41PQ6P2S7 1318 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 SALL3Q9BXA9 1300 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 SLC10A3P09131 477 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 PLCG2P16885 1265 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 IREB2P48200 963 aaKnown RBP24.11■■□□□ 1.45
CPSF1-209ENST00000532725 SH3BP5LQ7L8J4 393 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 HOOK2Q96ED9 719 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 ZIC5Q96T25 663 aa24.11■■□□□ 1.45
CPSF1-209ENST00000532725 PDE6AP16499 860 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 DYNLL1P63167 89 aaKnown RBP24.1■■□□□ 1.45
CPSF1-209ENST00000532725 NOGQ13253 232 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 PICALMQ13492 652 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 RASAL3Q86YV0 1011 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 TEX11Q8IYF3 940 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 PI4K2BQ8TCG2 481 aa24.1■■□□□ 1.45
CPSF1-209ENST00000532725 TCRBV5S4A2TA0A5A2 114 aa24.09■■□□□ 1.45
CPSF1-209ENST00000532725 MX1P20591 662 aa24.09■■□□□ 1.45
CPSF1-209ENST00000532725 B4GALNT3Q6L9W6 998 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms