RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	KRT26	Q7Z3Y9	468 aa		10.15	□□□□□ -0.78
PUM1-223	ENST00000532678	CTSW	P56202	376 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	HUNK	P57058	714 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	USP46	P62068	366 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	GCKR	Q14397	625 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	ANKRD18A	Q8IVF6	992 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	DPF2	Q92785	391 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	FRAT1	Q92837	279 aa	Predicted RBP	10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	ABHD8	Q96I13	439 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	BEGAIN	Q9BUH8	593 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	MXD3	Q9BW11	206 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	API5	Q9BZZ5	524 aa	Known RBP	10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	SRCIN1	Q9C0H9	1055 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	GREM2	Q9H772	168 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	PODXL2	Q9NZ53	605 aa		10.14	□□□□□ -0.79
PUM1-223	ENST00000532678	UBE3B	Q7Z3V4	1068 aa		10.13	□□□□□ -0.79
PUM1-223	ENST00000532678	GBA2	Q9HCG7	927 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-223	ENST00000532678	RCAN3	Q9UKA8	241 aa		10.13	□□□□□ -0.79
PUM1-223	ENST00000532678	XDH	P47989	1333 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	IPO8	O15397	1037 aa	Known RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ALDH1L1	O75891	902 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	VIL1	P09327	827 aa	Known RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	PRKCSH	P14314	528 aa	Predicted RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	TRIM27	P14373	513 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	RPS12	P25398	132 aa	Known RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	KLRK1	P26718	216 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ANGEL2	Q5VTE6	544 aa	Known RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ZKSCAN2	Q63HK3	967 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ATF7IP	Q6VMQ6	1270 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	TTLL11	Q8NHH1	800 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ARHGAP45	Q92619	1136 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	TNN	Q9UQP3	1299 aa		10.12	□□□□□ -0.79
PUM1-223	ENST00000532678	ZNF609	O15014	1411 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	FAM155A	B1AL88	458 aa	Predicted RBP	10.11	□□□□□ -0.79
PUM1-223	ENST00000532678		H7C1W4	665 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	GRM8	O00222	908 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	MS4A1	P11836	297 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	MAP2K2	P36507	400 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	TJAP1	Q5JTD0	557 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	TXNRD3	Q86VQ6	643 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	DCPS	Q96C86	337 aa	Known RBP	10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	CDCA5	Q96FF9	252 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	MINPP1	Q9UNW1	487 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	PAPPA2	Q9BXP8	1791 aa		10.11	□□□□□ -0.79
PUM1-223	ENST00000532678	AKAP11	Q9UKA4	1901 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	CCDC85C	A6NKD9	419 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	HSP90B1	P14625	803 aa	Known RBP	10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	ATP2B4	P23634	1241 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	CCT4	P50991	539 aa	Known RBP	10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	CASP7	P55210	303 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	SCARF1	Q14162	830 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	DIXDC1	Q155Q3	683 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	PRAMEF18	Q5VWM3	479 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	RGMB	Q6NW40	437 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	MOB2	Q70IA6	237 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	CLUAP1	Q96AJ1	413 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	HHIPL1	Q96JK4	782 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	GML	Q99445	158 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	CDC5L	Q99459	802 aa	Known RBP	10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	MED23	Q9ULK4	1368 aa		10.1	□□□□□ -0.79
PUM1-223	ENST00000532678	USP17L3	A6NCW0	530 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	USP17L4	A6NCW7	530 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	SNAP23	O00161	211 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	KDM4A	O75164	1064 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	SASH1	O94885	1247 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	ZNF157	P51786	506 aa	Predicted RBP	10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	ZNF280A	P59817	542 aa	Predicted RBP	10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	KIF23	Q02241	960 aa	Predicted RBP	10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	NOG	Q13253	232 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	USP17L1	Q7RTZ2	530 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	FTSJ3	Q8IY81	847 aa	Known RBP	10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	C2orf69	Q8N8R5	385 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	MCOLN1	Q9GZU1	580 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	KDM4C	Q9H3R0	1056 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	IL21	Q9HBE4	155 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	MYOZ2	Q9NPC6	264 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	PCDHB3	Q9Y5E6	796 aa		10.09	□□□□□ -0.79
PUM1-223	ENST00000532678	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	ITGA6	P23229	1130 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	NBPF9	Q3BBW0	867 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	RASAL3	Q86YV0	1011 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	DZIP1L	Q8IYY4	767 aa	Known RBP	10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	TMEM57	Q8N5G2	664 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	AGBL3	Q8NEM8	1001 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	SUCLG2	Q96I99	432 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	MTR	Q99707	1265 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	PLA2G12B	Q9BX93	195 aa		10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	BSDC1	Q9NW68	430 aa	Predicted RBP	10.08	□□□□□ -0.8
PUM1-223	ENST00000532678	UTY	O14607	1347 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	PLIN1	O60240	522 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	USP17L8	P0C7I0	530 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	RLBP1	P12271	317 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	GJA5	P36382	358 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	IGHMBP2	P38935	993 aa	Known RBP	10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	FUT2	Q10981	343 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	DGKZ	Q13574	1117 aa		10.07	□□□□□ -0.8
PUM1-223	ENST00000532678	DACT2	Q5SW24	774 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms