RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
COPB1-208ENST00000532088 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
COPB1-208ENST00000532088 GTF2IP78347 998 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 CIAPIN1Q6FI81 312 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 RFX7Q2KHR2 1363 aa15.19■□□□□ 0.02
COPB1-208ENST00000532088 SCN9AQ15858 1988 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
COPB1-208ENST00000532088 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
COPB1-208ENST00000532088 ZAP70P43403 619 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 CXCL9Q07325 125 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 TSHZ3Q63HK5 1081 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 SPTY2D1Q68D10 685 aaPredicted RBP15.18■□□□□ 0.02
COPB1-208ENST00000532088 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
COPB1-208ENST00000532088 GOLGB1Q14789 3259 aaKnown RBP15.18■□□□□ 0.02
COPB1-208ENST00000532088 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
COPB1-208ENST00000532088 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
COPB1-208ENST00000532088 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
COPB1-208ENST00000532088 RSBN1LQ6PCB5 846 aaPredicted RBP15.17■□□□□ 0.02
COPB1-208ENST00000532088 CNTROBQ8N137 903 aa15.17■□□□□ 0.02
COPB1-208ENST00000532088 AGBL3Q8NEM8 1001 aa15.17■□□□□ 0.02
COPB1-208ENST00000532088 MRIQ9BWK5 157 aa15.17■□□□□ 0.02
COPB1-208ENST00000532088 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
COPB1-208ENST00000532088 MAST3O60307 1309 aa15.17■□□□□ 0.02
COPB1-208ENST00000532088 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 PSMD14O00487 310 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 ST18O60284 1047 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 RGS3P49796 1198 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 GPC2Q8N158 579 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 KBTBD3Q8NAB2 608 aa15.16■□□□□ 0.02
COPB1-208ENST00000532088 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
COPB1-208ENST00000532088 GOLIM4O00461 696 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 GSPT1P15170 499 aaKnown RBP15.15■□□□□ 0.02
COPB1-208ENST00000532088 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 DPF2Q92785 391 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 GMLQ99445 158 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
COPB1-208ENST00000532088 KCNQ5Q9NR82 932 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
COPB1-208ENST00000532088 MAST2Q6P0Q8 1798 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 RAD17O75943 681 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 LDHBP07195 334 aaKnown RBP15.14■□□□□ 0.01
COPB1-208ENST00000532088 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
COPB1-208ENST00000532088 HDLBPQ00341 1268 aaKnown RBP15.14■□□□□ 0.01
COPB1-208ENST00000532088 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 CERS5Q8N5B7 392 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
COPB1-208ENST00000532088 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 ZNF541Q9H0D2 1346 aa15.14■□□□□ 0.01
COPB1-208ENST00000532088 HIP1O00291 1037 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 GSTO1P78417 241 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 SKAP1Q86WV1 359 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 SLF2Q8IX21 1173 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 DDX12PQ92771 950 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 FAM163AQ96GL9 167 aaPredicted RBP15.13■□□□□ 0.01
COPB1-208ENST00000532088 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
COPB1-208ENST00000532088 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 TRIM6-TRIM34B2RNG4 842 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 TULP1O00294 542 aaPredicted RBP15.12■□□□□ 0.01
COPB1-208ENST00000532088 SDSP20132 328 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 PRDX5P30044 214 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 UBE3CQ15386 1083 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.12■□□□□ 0.01
COPB1-208ENST00000532088 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
COPB1-208ENST00000532088 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 NDUFB9Q9Y6M9 179 aa15.12■□□□□ 0.01
COPB1-208ENST00000532088 GRXCR2A6NFK2 248 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
COPB1-208ENST00000532088 LDHCP07864 332 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 ADD2P35612 726 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 TBC1D9Q6ZT07 1266 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 DZIP1Q86YF9 867 aaKnown RBP15.11■□□□□ 0.01
COPB1-208ENST00000532088 EDC3Q96F86 508 aaKnown RBP15.11■□□□□ 0.01
COPB1-208ENST00000532088 FSD1Q9BTV5 496 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 SERPINA10Q9UK55 444 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
COPB1-208ENST00000532088 MAP4K4O95819 1239 aaPredicted RBP15.1■□□□□ 0.01
COPB1-208ENST00000532088 USP17L8P0C7I0 530 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 ZNF280AP59817 542 aaPredicted RBP15.1■□□□□ 0.01
COPB1-208ENST00000532088 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 RILPL2Q969X0 211 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 TTF2Q9UNY4 1162 aaKnown RBP15.1■□□□□ 0.01
COPB1-208ENST00000532088 LHX6Q9UPM6 363 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 GJA3Q9Y6H8 435 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 GAKO14976 1311 aa15.1■□□□□ 0.01
COPB1-208ENST00000532088 UTRNP46939 3433 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms