RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 PRKAB1Q9Y478 270 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 MTUS2Q5JR59 1369 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 PRC1O43663 620 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
ATM-216ENST00000531525 BMP4P12644 408 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 GJA8P48165 433 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 TYRO3Q06418 890 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 LAMC2Q13753 1193 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
ATM-216ENST00000531525 PLEKHG4Q58EX7 1191 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 ODR4Q5SWX8 454 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
ATM-216ENST00000531525 MKL1Q969V6 931 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 TRIM55Q9BYV6 548 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 CEP162Q5TB80 1403 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 CAMSAP2Q08AD1 1489 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 EIF2AK4Q9P2K8 1649 aaKnown RBP8.32□□□□□ -1.08
ATM-216ENST00000531525 CEP152O94986 1710 aa8.32□□□□□ -1.08
ATM-216ENST00000531525 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 ABCC3O15438 1527 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 MIA2Q96PC5 1412 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 SH3BP5O60239 455 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 CDC45O75419 566 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 EIF4BP23588 611 aaKnown RBP8.31□□□□□ -1.08
ATM-216ENST00000531525 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
ATM-216ENST00000531525 DGKZQ13574 1117 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 HIF1AQ16665 826 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 COX20Q5RI15 118 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 IER5Q5VY09 327 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 SVOPQ8N4V2 548 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
ATM-216ENST00000531525 FANCLQ9NW38 375 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 TERF2IPQ9NYB0 399 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 SRCAPQ6ZRS2 3230 aa8.31□□□□□ -1.08
ATM-216ENST00000531525 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
ATM-216ENST00000531525 MROH1Q8NDA8 1641 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 ZNF644Q9H582 1327 aaPredicted RBP8.3□□□□□ -1.08
ATM-216ENST00000531525 TGFBR3LH3BV60 316 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 PTPN12Q05209 780 aaKnown RBP8.3□□□□□ -1.08
ATM-216ENST00000531525 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 ZNF408Q9H9D4 720 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 BRD7Q9NPI1 651 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATM-216ENST00000531525 ERVK-7P63135 1459 aa8.3□□□□□ -1.08
ATM-216ENST00000531525 PAX3P23760 479 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 KCNQ4P56696 695 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
ATM-216ENST00000531525 ATCAYQ86WG3 371 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 RPS6KC1Q96S38 1066 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 STIM2Q9P246 746 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 SETD1AO15047 1707 aaKnown RBP8.29□□□□□ -1.08
ATM-216ENST00000531525 KIF3BO15066 747 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 BCRP11274 1271 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 ANKS3Q6ZW76 656 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 FERMT3Q86UX7 667 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 THEMISQ8N1K5 641 aaPredicted RBP8.29□□□□□ -1.08
ATM-216ENST00000531525 SGSM3Q96HU1 749 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 SNTG2Q9NY99 539 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 POLIQ9UNA4 740 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 TTF2Q9UNY4 1162 aaKnown RBP8.29□□□□□ -1.08
ATM-216ENST00000531525 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
ATM-216ENST00000531525 MAST1Q9Y2H9 1570 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 SCAF11Q99590 1463 aaKnown RBP8.28□□□□□ -1.08
ATM-216ENST00000531525 WASHC2CQ9Y4E1 1318 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 CEP89Q96ST8 783 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 KLF15Q9UIH9 416 aa8.28□□□□□ -1.08
ATM-216ENST00000531525 SLIT1O75093 1534 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 OIP5O43482 229 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 PPFIA4O75335 1185 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 NEFLP07196 543 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 ARAFP10398 606 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 GYS2P54840 703 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 SH3TC2Q8TF17 1288 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 FRMD6Q96NE9 622 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 SLC30A3Q99726 388 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 KANSL2Q9H9L4 492 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 GGA1Q9UJY5 639 aa8.27□□□□□ -1.09
ATM-216ENST00000531525 GDF2Q9UK05 429 aaPredicted RBP8.27□□□□□ -1.09
ATM-216ENST00000531525 NCOA2Q15596 1464 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms