RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SPRED2Q7Z698 418 aa9.55□□□□□ -0.88
PTPRK-220ENST00000531466 WFDC3Q8IUB2 231 aa9.55□□□□□ -0.88
PTPRK-220ENST00000531466 NPHS2Q9NP85 383 aa9.55□□□□□ -0.88
PTPRK-220ENST00000531466 ARID1BQ8NFD5 2236 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-220ENST00000531466 ITPKAP23677 461 aa9.54□□□□□ -0.88
PTPRK-220ENST00000531466 ORC1Q13415 861 aa9.54□□□□□ -0.88
PTPRK-220ENST00000531466 ZNF792Q3KQV3 632 aa9.54□□□□□ -0.88
PTPRK-220ENST00000531466 ICMTO60725 284 aa9.53□□□□□ -0.88
PTPRK-220ENST00000531466 BNIP3Q12983 259 aa9.53□□□□□ -0.88
PTPRK-220ENST00000531466 CDK5R2Q13319 367 aa9.53□□□□□ -0.88
PTPRK-220ENST00000531466 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
PTPRK-220ENST00000531466 H3BRB1 525 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 FAM87AP0C7U9 286 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 LIG1P18858 919 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 CYP27C1Q4G0S4 372 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.89
PTPRK-220ENST00000531466 PLD6Q8N2A8 252 aaKnown RBP9.52□□□□□ -0.89
PTPRK-220ENST00000531466 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
PTPRK-220ENST00000531466 ZC3H12CQ9C0D7 883 aaKnown RBP9.52□□□□□ -0.89
PTPRK-220ENST00000531466 TUT1Q9H6E5 874 aaKnown RBP9.52□□□□□ -0.89
PTPRK-220ENST00000531466 TMPRSS2O15393 492 aa9.51□□□□□ -0.89
PTPRK-220ENST00000531466 NEFLP07196 543 aa9.51□□□□□ -0.89
PTPRK-220ENST00000531466 ZNF157P51786 506 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-220ENST00000531466 ZNF648Q5T619 568 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-220ENST00000531466 KRTAP4-7Q9BYR0 210 aa9.51□□□□□ -0.89
PTPRK-220ENST00000531466 CCDC86Q9H6F5 360 aaKnown RBP9.51□□□□□ -0.89
PTPRK-220ENST00000531466 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
PTPRK-220ENST00000531466 ABCB6Q9NP58 842 aa9.51□□□□□ -0.89
PTPRK-220ENST00000531466 CPNE3O75131 537 aaKnown RBP9.5□□□□□ -0.89
PTPRK-220ENST00000531466 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
PTPRK-220ENST00000531466 EGFL7Q9UHF1 273 aa9.5□□□□□ -0.89
PTPRK-220ENST00000531466 SERPINB4P48594 390 aa9.49□□□□□ -0.89
PTPRK-220ENST00000531466 ECM1Q16610 540 aa9.49□□□□□ -0.89
PTPRK-220ENST00000531466 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
PTPRK-220ENST00000531466 SYNGAP1Q96PV0 1343 aa9.49□□□□□ -0.89
PTPRK-220ENST00000531466 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 NDUFB5O43674 189 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 CD96P40200 585 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 FAAP100Q0VG06 881 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 NETO1Q8TDF5 533 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
PTPRK-220ENST00000531466 U3KQE9 123 aa9.48□□□□□ -0.89
PTPRK-220ENST00000531466 TMEM238LA0A1B0GVL6 79 aa9.47□□□□□ -0.89
PTPRK-220ENST00000531466 BIN1O00499 593 aa9.47□□□□□ -0.89
PTPRK-220ENST00000531466 GADD45BO75293 160 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-220ENST00000531466 CD8BP10966 210 aa9.47□□□□□ -0.89
PTPRK-220ENST00000531466 ID3Q02535 119 aa9.47□□□□□ -0.89
PTPRK-220ENST00000531466 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
PTPRK-220ENST00000531466 ATXN3LQ9H3M9 355 aa9.47□□□□□ -0.89
PTPRK-220ENST00000531466 ZNF862O60290 1169 aa9.46□□□□□ -0.9
PTPRK-220ENST00000531466 FUT4P22083 530 aa9.46□□□□□ -0.9
PTPRK-220ENST00000531466 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
PTPRK-220ENST00000531466 RPS26P11Q5JNZ5 115 aaPredicted RBP9.46□□□□□ -0.9
PTPRK-220ENST00000531466 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
PTPRK-220ENST00000531466 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
PTPRK-220ENST00000531466 CCDC74AQ96AQ1 378 aa9.46□□□□□ -0.9
PTPRK-220ENST00000531466 FAM129BQ96TA1 746 aa9.46□□□□□ -0.9
PTPRK-220ENST00000531466 RC3H2Q9HBD1 1191 aaKnown RBP9.46□□□□□ -0.9
PTPRK-220ENST00000531466 RNGTTO60942 597 aaKnown RBP9.45□□□□□ -0.9
PTPRK-220ENST00000531466 LEFTY1O75610 366 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 PDE3BQ13370 1112 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 ZNF124Q15973 351 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 C1orf115Q9H7X2 142 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 DISC1Q9NRI5 854 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 MBNL3Q9NUK0 354 aaKnown RBP9.45□□□□□ -0.9
PTPRK-220ENST00000531466 ADAMTS6Q9UKP5 1117 aa9.45□□□□□ -0.9
PTPRK-220ENST00000531466 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
PTPRK-220ENST00000531466 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
PTPRK-220ENST00000531466 HCLS1P14317 486 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-220ENST00000531466 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
PTPRK-220ENST00000531466 GRM2Q14416 872 aa9.43□□□□□ -0.9
PTPRK-220ENST00000531466 TTLL4Q14679 1199 aa9.43□□□□□ -0.9
PTPRK-220ENST00000531466 GLIS3Q8NEA6 775 aa9.43□□□□□ -0.9
PTPRK-220ENST00000531466 NIF3L1Q9GZT8 377 aa9.43□□□□□ -0.9
PTPRK-220ENST00000531466 PCDHGC5Q9Y5F6 944 aa9.43□□□□□ -0.9
PTPRK-220ENST00000531466 GPR182O15218 404 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 ATG4DQ86TL0 474 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-220ENST00000531466 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 FAM168AQ92567 244 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 VAV3Q9UKW4 847 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
PTPRK-220ENST00000531466 PRKCQQ04759 706 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 IFI16Q16666 785 aaKnown RBP9.41□□□□□ -0.9
PTPRK-220ENST00000531466 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 LRRN4CLQ8ND94 238 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 EPS8L3Q8TE67 593 aaKnown RBP9.41□□□□□ -0.9
PTPRK-220ENST00000531466 KCNB2Q92953 911 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 DNAJC25Q9H1X3 360 aa9.41□□□□□ -0.9
PTPRK-220ENST00000531466 AOC3Q16853 763 aa9.4□□□□□ -0.9
PTPRK-220ENST00000531466 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
PTPRK-220ENST00000531466 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-220ENST00000531466 NEFMP07197 916 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms