RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
PTPN11-204ENST00000531326 MEIS3Q99687 375 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 EFCC1Q9HA90 598 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 MAST3O60307 1309 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 POTEFA5A3E0 1075 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 SPDYE5A6NIY4 337 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 SLC5A1P13866 664 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
PTPN11-204ENST00000531326 C20orf194Q5TEA3 1177 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 LPIN2Q92539 896 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
PTPN11-204ENST00000531326 RBBP6Q7Z6E9 1792 aaKnown RBP22.2■■□□□ 1.14
PTPN11-204ENST00000531326 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
PTPN11-204ENST00000531326 TAF1CQ15572 869 aaPredicted RBP22.2■■□□□ 1.14
PTPN11-204ENST00000531326 ZKSCAN4Q969J2 545 aaPredicted RBP22.2■■□□□ 1.14
PTPN11-204ENST00000531326 WRNIP1Q96S55 665 aa22.2■■□□□ 1.14
PTPN11-204ENST00000531326 ITPRIPQ8IWB1 547 aa22.19■■□□□ 1.14
PTPN11-204ENST00000531326 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
PTPN11-204ENST00000531326 RPAP1Q9BWH6 1393 aaPredicted RBP22.19■■□□□ 1.14
PTPN11-204ENST00000531326 UBTFL1P0CB47 393 aaPredicted RBP22.18■■□□□ 1.14
PTPN11-204ENST00000531326 ERO1BQ86YB8 467 aa22.18■■□□□ 1.14
PTPN11-204ENST00000531326 ARMC5Q96C12 935 aa22.18■■□□□ 1.14
PTPN11-204ENST00000531326 SIL1Q9H173 461 aa22.18■■□□□ 1.14
PTPN11-204ENST00000531326 ZFYVE28Q9HCC9 887 aa22.18■■□□□ 1.14
PTPN11-204ENST00000531326 KIAA0100Q14667 2235 aaKnown RBP22.17■■□□□ 1.14
PTPN11-204ENST00000531326 IRF6O14896 467 aa22.17■■□□□ 1.14
PTPN11-204ENST00000531326 DAGLAQ9Y4D2 1042 aa22.17■■□□□ 1.14
PTPN11-204ENST00000531326 ZSWIM8A7E2V4 1837 aa22.17■■□□□ 1.14
PTPN11-204ENST00000531326 ZBTB7BO15156 539 aaPredicted RBP22.16■■□□□ 1.14
PTPN11-204ENST00000531326 GNAI3P08754 354 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 PRDX5P30044 214 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 MVPQ14764 893 aaKnown RBP22.16■■□□□ 1.14
PTPN11-204ENST00000531326 DIXDC1Q155Q3 683 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 MIGA2Q7L4E1 593 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 HOOK2Q96ED9 719 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 FBXO3Q9UK99 471 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
PTPN11-204ENST00000531326 BTBD19C9JJ37 291 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 CIAO1O76071 339 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 CETPP11597 493 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 DCAF15Q66K64 600 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 CDC42EP5Q6NZY7 148 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 FAM151AQ8WW52 585 aa22.15■■□□□ 1.14
PTPN11-204ENST00000531326 LRRFIP2Q9Y608 721 aaKnown RBP22.15■■□□□ 1.14
PTPN11-204ENST00000531326 INPP5BP32019 993 aa22.14■■□□□ 1.13
PTPN11-204ENST00000531326 NFIAQ12857 509 aa22.14■■□□□ 1.13
PTPN11-204ENST00000531326 PPIL2Q13356 520 aa22.14■■□□□ 1.13
PTPN11-204ENST00000531326 ZNF341Q9BYN7 854 aa22.14■■□□□ 1.13
PTPN11-204ENST00000531326 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.13
PTPN11-204ENST00000531326 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.13
PTPN11-204ENST00000531326 TLR2O60603 784 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 PHKA1P46020 1223 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 TCP10Q12799 353 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 SNAPC2Q13487 334 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 ARHGAP39Q9C0H5 1083 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 ZCCHC17Q9NP64 241 aaKnown RBP22.13■■□□□ 1.13
PTPN11-204ENST00000531326 PTCH2Q9Y6C5 1203 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 AK9Q5TCS8 1911 aa22.13■■□□□ 1.13
PTPN11-204ENST00000531326 EN2P19622 333 aaPredicted RBP22.12■■□□□ 1.13
PTPN11-204ENST00000531326 ZNF333Q96JL9 665 aa22.12■■□□□ 1.13
PTPN11-204ENST00000531326 FAM198AQ9UFP1 575 aa22.12■■□□□ 1.13
PTPN11-204ENST00000531326 ZNF112Q9UJU3 913 aa22.12■■□□□ 1.13
PTPN11-204ENST00000531326 DDX19BQ9UMR2 479 aa22.12■■□□□ 1.13
PTPN11-204ENST00000531326 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
PTPN11-204ENST00000531326 SALL1Q9NSC2 1324 aa22.11■■□□□ 1.13
PTPN11-204ENST00000531326 LDHBP07195 334 aaKnown RBP22.11■■□□□ 1.13
PTPN11-204ENST00000531326 IL15P40933 162 aaPredicted RBP22.11■■□□□ 1.13
PTPN11-204ENST00000531326 PPATQ06203 517 aa22.11■■□□□ 1.13
PTPN11-204ENST00000531326 HDAC5Q9UQL6 1122 aa22.11■■□□□ 1.13
PTPN11-204ENST00000531326 GNAI2P04899 355 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 ADORA1P30542 326 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 ARHGEF6Q15052 776 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 ZFPM1Q8IX07 1006 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 USP40Q9NVE5 1235 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 GNL3LQ9NVN8 582 aaKnown RBP22.1■■□□□ 1.13
PTPN11-204ENST00000531326 DENND2AQ9ULE3 1009 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 MYH2Q9UKX2 1941 aa22.1■■□□□ 1.13
PTPN11-204ENST00000531326 LACTBP83111 547 aaPredicted RBP22.09■■□□□ 1.13
PTPN11-204ENST00000531326 SLC9C1Q4G0N8 1177 aa22.09■■□□□ 1.13
PTPN11-204ENST00000531326 COPRSQ9NQ92 184 aa22.09■■□□□ 1.13
PTPN11-204ENST00000531326 SEMA3EO15041 775 aa22.08■■□□□ 1.13
PTPN11-204ENST00000531326 ZBTB22O15209 634 aa22.08■■□□□ 1.13
PTPN11-204ENST00000531326 WDHD1O75717 1129 aaPredicted RBP22.08■■□□□ 1.13
PTPN11-204ENST00000531326 CCDC102BQ68D86 513 aa22.08■■□□□ 1.13
PTPN11-204ENST00000531326 C1orf115Q9H7X2 142 aa22.08■■□□□ 1.13
PTPN11-204ENST00000531326 KCNH4Q9UQ05 1017 aa22.08■■□□□ 1.13
PTPN11-204ENST00000531326 MOGSQ13724 837 aa22.07■■□□□ 1.12
PTPN11-204ENST00000531326 NOL9Q5SY16 702 aaKnown RBP22.07■■□□□ 1.12
PTPN11-204ENST00000531326 C17orf99Q6UX52 265 aa22.07■■□□□ 1.12
PTPN11-204ENST00000531326 ZBTB40Q9NUA8 1239 aa22.07■■□□□ 1.12
PTPN11-204ENST00000531326 ATRNL1Q5VV63 1379 aa22.07■■□□□ 1.12
PTPN11-204ENST00000531326 DOCK2Q92608 1830 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 CTGFP29279 349 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 TIMM10P62072 90 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 MTX1Q13505 466 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 ANKRD23Q86SG2 305 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 NBPF11Q86T75 865 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 TMEM106CQ9BVX2 250 aa22.06■■□□□ 1.12
PTPN11-204ENST00000531326 PCDH10Q9P2E7 1040 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms