RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 HNRNPUQ00839 825 aaKnown RBP eCLIP27.6■■■□□ 2.01
TRAPPC4-210ENST00000531290 CDC42EP5Q6NZY7 148 aa27.6■■■□□ 2.01
TRAPPC4-210ENST00000531290 FAM151AQ8WW52 585 aa27.6■■■□□ 2.01
TRAPPC4-210ENST00000531290 OTUD5Q96G74 571 aa27.6■■■□□ 2.01
TRAPPC4-210ENST00000531290 MS4A4AQ96JQ5 239 aa27.6■■■□□ 2.01
TRAPPC4-210ENST00000531290 TFCP2Q12800 502 aa27.59■■■□□ 2.01
TRAPPC4-210ENST00000531290 CRHR2Q13324 411 aa27.59■■■□□ 2.01
TRAPPC4-210ENST00000531290 USP40Q9NVE5 1235 aa27.59■■■□□ 2.01
TRAPPC4-210ENST00000531290 CCL15-CCL14A0A0B4J2E2 113 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 A0A1B0GUL7 405 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 ZBTB22O15209 634 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 TCP10Q12799 353 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 CCL15Q16663 113 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 ZNF341Q9BYN7 854 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 TNNQ9UQP3 1299 aa27.58■■■□□ 2.01
TRAPPC4-210ENST00000531290 SPDYE5A6NIY4 337 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 MVPQ14764 893 aaKnown RBP27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ZKSCAN2Q63HK3 967 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 MIGA2Q7L4E1 593 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ERO1BQ86YB8 467 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 BRI3BPQ8WY22 251 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ZKSCAN4Q969J2 545 aaPredicted RBP27.57■■■□□ 2
TRAPPC4-210ENST00000531290 XAGE2Q96GT9 111 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ERO1AQ96HE7 468 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 NEUROD6Q96NK8 337 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 TRIM17Q9Y577 477 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ARAP2Q8WZ64 1704 aa27.57■■■□□ 2
TRAPPC4-210ENST00000531290 ABCF2Q9UG63 623 aa27.56■■■□□ 2
TRAPPC4-210ENST00000531290 SNCAIPQ9Y6H5 919 aa27.56■■■□□ 2
TRAPPC4-210ENST00000531290 G3BP1Q13283 466 aaKnown RBP eCLIP27.55■■■□□ 2
TRAPPC4-210ENST00000531290 RASGRF1Q13972 1273 aa27.55■■■□□ 2
TRAPPC4-210ENST00000531290 SPTY2D1Q68D10 685 aaPredicted RBP27.55■■■□□ 2
TRAPPC4-210ENST00000531290 DZIP1Q86YF9 867 aaKnown RBP27.55■■■□□ 2
TRAPPC4-210ENST00000531290 SLF2Q8IX21 1173 aa27.55■■■□□ 2
TRAPPC4-210ENST00000531290 RPAP1Q9BWH6 1393 aaPredicted RBP27.55■■■□□ 2
TRAPPC4-210ENST00000531290 WDHD1O75717 1129 aaPredicted RBP27.54■■■□□ 2
TRAPPC4-210ENST00000531290 SP3Q02447 781 aa27.54■■■□□ 2
TRAPPC4-210ENST00000531290 NFIAQ12857 509 aa27.54■■■□□ 2
TRAPPC4-210ENST00000531290 GORABQ5T7V8 394 aa27.54■■■□□ 2
TRAPPC4-210ENST00000531290 ZFYVE28Q9HCC9 887 aa27.54■■■□□ 2
TRAPPC4-210ENST00000531290 CETPP11597 493 aa27.53■■■□□ 2
TRAPPC4-210ENST00000531290 OTOP1Q7RTM1 612 aa27.53■■■□□ 2
TRAPPC4-210ENST00000531290 TMEM57Q8N5G2 664 aa27.53■■■□□ 2
TRAPPC4-210ENST00000531290 PDS5AQ29RF7 1337 aaKnown RBP27.52■■■□□ 2
TRAPPC4-210ENST00000531290 SNAPC2Q13487 334 aa27.52■■■□□ 2
TRAPPC4-210ENST00000531290 TAF1CQ15572 869 aaPredicted RBP27.52■■■□□ 2
TRAPPC4-210ENST00000531290 CD99L2Q8TCZ2 262 aa27.52■■■□□ 2
TRAPPC4-210ENST00000531290 FAM198AQ9UFP1 575 aa27.52■■■□□ 2
TRAPPC4-210ENST00000531290 PNMA6EA0A0J9YXQ4 647 aa27.51■■□□□ 1.99
TRAPPC4-210ENST00000531290 PPIL2Q13356 520 aa27.51■■□□□ 1.99
TRAPPC4-210ENST00000531290 IRF6O14896 467 aa27.5■■□□□ 1.99
TRAPPC4-210ENST00000531290 INPP5BP32019 993 aa27.5■■□□□ 1.99
TRAPPC4-210ENST00000531290 FAM43AQ8N2R8 423 aa27.5■■□□□ 1.99
TRAPPC4-210ENST00000531290 EFCC1Q9HA90 598 aa27.5■■□□□ 1.99
TRAPPC4-210ENST00000531290 PPATQ06203 517 aa27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 ARHGEF6Q15052 776 aa27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 ERICH6Q7L0X2 663 aa27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 FTSJ3Q8IY81 847 aaKnown RBP27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 FAM163AQ96GL9 167 aaPredicted RBP27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 ZNF112Q9UJU3 913 aa27.49■■□□□ 1.99
TRAPPC4-210ENST00000531290 GAKO14976 1311 aa27.48■■□□□ 1.99
TRAPPC4-210ENST00000531290 ZFPM1Q8IX07 1006 aa27.48■■□□□ 1.99
TRAPPC4-210ENST00000531290 IDI2Q9BXS1 227 aa27.48■■□□□ 1.99
TRAPPC4-210ENST00000531290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC4-210ENST00000531290 ENTPD3O75355 529 aa27.47■■□□□ 1.99
TRAPPC4-210ENST00000531290 RGS3P49796 1198 aa27.47■■□□□ 1.99
TRAPPC4-210ENST00000531290 ZSCAN29Q8IWY8 852 aaPredicted RBP27.47■■□□□ 1.99
TRAPPC4-210ENST00000531290 ZCCHC17Q9NP64 241 aaKnown RBP27.47■■□□□ 1.99
TRAPPC4-210ENST00000531290 HMG20BQ9P0W2 317 aa27.47■■□□□ 1.99
TRAPPC4-210ENST00000531290 SPATA5Q8NB90 893 aa27.46■■□□□ 1.99
TRAPPC4-210ENST00000531290 PTPN22Q9Y2R2 807 aa27.46■■□□□ 1.99
TRAPPC4-210ENST00000531290 BTBD19C9JJ37 291 aa27.45■■□□□ 1.98
TRAPPC4-210ENST00000531290 BTDP43251 543 aa27.45■■□□□ 1.98
TRAPPC4-210ENST00000531290 MECOMQ03112 1051 aa27.45■■□□□ 1.98
TRAPPC4-210ENST00000531290 OS9Q13438 667 aaPredicted RBP27.45■■□□□ 1.98
TRAPPC4-210ENST00000531290 GSTO1P78417 241 aa27.44■■□□□ 1.98
TRAPPC4-210ENST00000531290 ATP8B2P98198 1209 aa27.44■■□□□ 1.98
TRAPPC4-210ENST00000531290 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.44■■□□□ 1.98
TRAPPC4-210ENST00000531290 MROH7-TTC4A0A0A0MT08 1334 aa27.43■■□□□ 1.98
TRAPPC4-210ENST00000531290 LDHCP07864 332 aa27.43■■□□□ 1.98
TRAPPC4-210ENST00000531290 UQCRFS1P1P0C7P4 283 aa27.43■■□□□ 1.98
TRAPPC4-210ENST00000531290 NOL9Q5SY16 702 aaKnown RBP27.43■■□□□ 1.98
TRAPPC4-210ENST00000531290 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
TRAPPC4-210ENST00000531290 GPR75-ASB3A0A0A6YYF3 556 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 TLR2O60603 784 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 ARID4AP29374 1257 aaPredicted RBP27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 PICALMQ13492 652 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 POLA2Q14181 598 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 TBC1D9Q6ZT07 1266 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
TRAPPC4-210ENST00000531290 SURF6O75683 361 aaKnown RBP27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 PI16Q6UXB8 463 aa27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 SSH3Q8TE77 659 aa27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 GPR108Q9NPR9 543 aa27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 PICK1Q9NRD5 415 aa27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 KCNH4Q9UQ05 1017 aa27.41■■□□□ 1.98
TRAPPC4-210ENST00000531290 KIF22Q14807 665 aa27.4■■□□□ 1.98
TRAPPC4-210ENST00000531290 C1orf115Q9H7X2 142 aa27.4■■□□□ 1.98
TRAPPC4-210ENST00000531290 LRP2BPQ9P2M1 347 aa27.4■■□□□ 1.98
TRAPPC4-210ENST00000531290 OTOFQ9HC10 1997 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms