RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 IFIT2P09913 472 aaKnown RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 MCM4P33991 863 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 G3BP1Q13283 466 aaKnown RBP eCLIP6.73□□□□□ -1.33
PCF11-205ENST00000530906 GAS6Q14393 721 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 SUZ12Q15022 739 aaKnown RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 RAB3GAP1Q15042 981 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 RABL6Q3YEC7 729 aaPredicted RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 LRP10Q7Z4F1 713 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 PI4K2BQ8TCG2 481 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 DDX17Q92841 729 aaKnown RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 COPRSQ9NQ92 184 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 IGKV5-2P06315 115 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
PCF11-205ENST00000530906 RNF144AP50876 292 aaPredicted RBP6.72□□□□□ -1.33
PCF11-205ENST00000530906 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 EVI5LQ96CN4 794 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 INTS4Q96HW7 963 aaKnown RBP6.72□□□□□ -1.33
PCF11-205ENST00000530906 CYLDQ9NQC7 956 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 ATG3Q9NT62 314 aa6.72□□□□□ -1.33
PCF11-205ENST00000530906 WNK3Q9BYP7 1800 aa6.71□□□□□ -1.33
PCF11-205ENST00000530906 DISP2A7MBM2 1401 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 SGSM2O43147 1006 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 ADAMTS2O95450 1211 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 ANXA1P04083 346 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 HSPA4P34932 840 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 EVA1CP58658 441 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 TRIM28Q13263 835 aaKnown RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 SLC39A6Q13433 755 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 CWF19L2Q2TBE0 894 aaKnown RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 L1TD1Q5T7N2 865 aaKnown RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 KIAA1211Q6ZU35 1233 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 RILPL2Q969X0 211 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 SUCLG2Q96I99 432 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 GJD4Q96KN9 370 aaPredicted RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 BICC1Q9H694 974 aaKnown RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 IL1RAPL2Q9NP60 686 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 GPR108Q9NPR9 543 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 DIAPH3Q9NSV4 1193 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 CICQ96RK0 1608 aaPredicted RBP6.71□□□□□ -1.34
PCF11-205ENST00000530906 SPEF2Q9C093 1822 aa6.71□□□□□ -1.34
PCF11-205ENST00000530906 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
PCF11-205ENST00000530906 AIMP1Q12904 312 aaKnown RBP6.7□□□□□ -1.34
PCF11-205ENST00000530906 CUL4AQ13619 759 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 LYPD4Q6UWN0 246 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 PRICKLE2Q7Z3G6 844 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 KAZALD1Q96I82 304 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 MYD88Q99836 296 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 TM6SF1Q9BZW5 370 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 ANO2Q9NQ90 1003 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 CWC25Q9NXE8 425 aaPredicted RBP6.7□□□□□ -1.34
PCF11-205ENST00000530906 TMOD3Q9NYL9 352 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 THRAP3Q9Y2W1 955 aaKnown RBP6.7□□□□□ -1.34
PCF11-205ENST00000530906 USP16Q9Y5T5 823 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 TOGARAM1Q9Y4F4 1720 aa6.7□□□□□ -1.34
PCF11-205ENST00000530906 PRAMEF22A3QJZ6 481 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 H7C1W4 665 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 CIAO1O76071 339 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 STARD3NLO95772 234 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 FBXO45P0C2W1 286 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 MYL6BP14649 208 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 ATP5JP18859 108 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 TMEM259Q4ZIN3 620 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 HSP90AB3PQ58FF7 597 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 AACSQ86V21 672 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 KCNB2Q92953 911 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 TJP1Q07157 1748 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 NWD2Q9ULI1 1742 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 ABCC12Q96J65 1359 aa6.69□□□□□ -1.34
PCF11-205ENST00000530906 A0A087WZG4 1122 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 ZBBXA8MT70 800 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 ATP5J2-PTCD1G3V325 749 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 TRAK2O60296 914 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 SASH1O94885 1247 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 CYP2E1P05181 493 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 ZKSCAN1P17029 563 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 RHOQP17081 205 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 GPC1P35052 558 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 IRS1P35568 1242 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 IL15P40933 162 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 RFX5P48382 616 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 NEK4P51957 841 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 CASP7P55210 303 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 RNF20Q5VTR2 975 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.68□□□□□ -1.34
PCF11-205ENST00000530906 TNPO1Q92973 898 aaKnown RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 ZNF837Q96EG3 531 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 ZSCAN31Q96LW9 406 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 PLA2G12BQ9BX93 195 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 LSG1Q9H089 658 aaKnown RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 HMG20BQ9P0W2 317 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms