RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 MYH2Q9UKX2 1941 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 MYO5AQ9Y4I1 1855 aaKnown RBP5.84□□□□□ -1.47
SSBP3-213ENST00000530618 SIPA1L1O43166 1804 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 PNMA6EA0A0J9YXQ4 647 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 SPDYE2BA6NHP3 402 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 GPR25O00155 361 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 SPDYE6P0CI01 402 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 MMP14P50281 582 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 FKBP1AP62942 108 aaKnown RBP5.84□□□□□ -1.47
SSBP3-213ENST00000530618 UBE4AQ14139 1066 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 ANKRD45Q5TZF3 282 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 ZNF804AQ7Z570 1209 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 APOBEC3FQ8IUX4 373 aaKnown RBP5.84□□□□□ -1.47
SSBP3-213ENST00000530618 SPNS2Q8IVW8 549 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 VGLL2Q8N8G2 317 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 LPIN2Q92539 896 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 PUS3Q9BZE2 481 aaKnown RBP5.84□□□□□ -1.47
SSBP3-213ENST00000530618 DEFB129Q9H1M3 183 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 DCTPP1Q9H773 170 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 GPR108Q9NPR9 543 aa5.84□□□□□ -1.47
SSBP3-213ENST00000530618 COL6A3P12111 3177 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 TESPA1A2RU30 521 aaPredicted RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 APBB1O00213 710 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 IGSF3O75054 1194 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 USP2O75604 605 aaPredicted RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 PDE8BO95263 885 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 UQCRFS1P1P0C7P4 283 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 MKRN3Q13064 507 aaKnown RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 ATP2B3Q16720 1220 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 NBPF12Q5TAG4 269 aaPredicted RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 CASC1Q6TDU7 716 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 ZGPATQ8N5A5 531 aaKnown RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 TDRD7Q8NHU6 1098 aaKnown RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 RHPN1Q8TCX5 695 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 FAM163AQ96GL9 167 aaPredicted RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 FAM84BQ96KN1 310 aaPredicted RBP5.83□□□□□ -1.48
SSBP3-213ENST00000530618 NEUROD6Q96NK8 337 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 PTPN18Q99952 460 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 EXOC6BQ9Y2D4 811 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 RIPOR2Q9Y4F9 1068 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 PCDHB15Q9Y5E8 787 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 GTF3C3Q9Y5Q9 886 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 ATAD5Q96QE3 1844 aa5.83□□□□□ -1.48
SSBP3-213ENST00000530618 AK9Q5TCS8 1911 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 DOCK1Q14185 1865 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 CLRN2A0PK11 232 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 SEMA3EO15041 775 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 ZBTB48P10074 688 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 RFX5P48382 616 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 PRKG1Q13976 671 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 TTF1Q15361 905 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 SPDYE2Q495Y8 402 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 TTC39AQ5SRH9 613 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 FBXO46Q6PJ61 603 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 TMED8Q6PL24 325 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 OTOP1Q7RTM1 612 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 AACSQ86V21 672 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 CHD1LQ86WJ1 897 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 IFNL1Q8IU54 200 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 OGFOD1Q8N543 542 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 FBXW7Q969H0 707 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 MS4A4AQ96JQ5 239 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 BCL11AQ9H165 835 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 ANGEL1Q9UNK9 670 aaKnown RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 PA2G4Q9UQ80 394 aaKnown RBP5.82□□□□□ -1.48
SSBP3-213ENST00000530618 PPP2R3BQ9Y5P8 575 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 FOCADQ5VW36 1801 aa5.82□□□□□ -1.48
SSBP3-213ENST00000530618 LAMA2P24043 3122 aaKnown RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 MAST3O60307 1309 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 TTC41PQ6P2S7 1318 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 LOC285556D6RIA3 1793 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 A0A1B0GUL7 405 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 POTEFA5A3E0 1075 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 UNCXA6NJT0 531 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 FKTNO75072 461 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 GLRX3O76003 335 aaKnown RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 FGFR2P21802 821 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 HIBADHP31937 336 aaKnown RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 GYG1P46976 350 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 NUCB1Q02818 461 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 SREBF2Q12772 1141 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 TFCP2Q12800 502 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 RASA3Q14644 834 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 DLGAP5Q15398 846 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 PKN2Q16513 984 aaKnown RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 LRRC24Q50LG9 513 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 TNNI3KQ59H18 835 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 PRPF38BQ5VTL8 546 aaKnown RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 SPTY2D1Q68D10 685 aaPredicted RBP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 B4GALNT3Q6L9W6 998 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 ARMC9Q7Z3E5 817 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 FBXO33Q7Z6M2 555 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 SLF2Q8IX21 1173 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 KLHDC4Q8TBB5 520 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 TBC1D22AQ8WUA7 517 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms