RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PTPN18Q99952 460 aa25.91■■□□□ 1.74
SMPD1-204ENST00000530395 AKAP2Q9Y2D5 859 aa25.91■■□□□ 1.74
SMPD1-204ENST00000530395 CCL15-CCL14A0A0B4J2E2 113 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 ZBTB22O15209 634 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 ADORA1P30542 326 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 CCL15Q16663 113 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 CCDC102BQ68D86 513 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 FAM151AQ8WW52 585 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 ERO1AQ96HE7 468 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 MS4A4AQ96JQ5 239 aa25.9■■□□□ 1.74
SMPD1-204ENST00000530395 SPDYE5A6NIY4 337 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 GNAI2P04899 355 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 CDC42EP5Q6NZY7 148 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 ERO1BQ86YB8 467 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 ZNF341Q9BYN7 854 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 TRIM17Q9Y577 477 aa25.89■■□□□ 1.74
SMPD1-204ENST00000530395 BCAR3O75815 825 aa25.88■■□□□ 1.73
SMPD1-204ENST00000530395 BRI3BPQ8WY22 251 aa25.88■■□□□ 1.73
SMPD1-204ENST00000530395 SNCAIPQ9Y6H5 919 aa25.88■■□□□ 1.73
SMPD1-204ENST00000530395 PDS5AQ29RF7 1337 aaKnown RBP25.88■■□□□ 1.73
SMPD1-204ENST00000530395 A0A1B0GUL7 405 aa25.87■■□□□ 1.73
SMPD1-204ENST00000530395 WDHD1O75717 1129 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-204ENST00000530395 TIMM10P62072 90 aa25.87■■□□□ 1.73
SMPD1-204ENST00000530395 MVPQ14764 893 aaKnown RBP25.87■■□□□ 1.73
SMPD1-204ENST00000530395 PDE4DIPQ5VU43 2346 aa25.87■■□□□ 1.73
SMPD1-204ENST00000530395 HTTP42858 3142 aa25.87■■□□□ 1.73
SMPD1-204ENST00000530395 TCP10Q12799 353 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 TFCP2Q12800 502 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 TAF1CQ15572 869 aaPredicted RBP25.86■■□□□ 1.73
SMPD1-204ENST00000530395 OTOP1Q7RTM1 612 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 DZIP1Q86YF9 867 aaKnown RBP25.86■■□□□ 1.73
SMPD1-204ENST00000530395 ZKSCAN4Q969J2 545 aaPredicted RBP25.86■■□□□ 1.73
SMPD1-204ENST00000530395 CLUAP1Q96AJ1 413 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 USP40Q9NVE5 1235 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 DOCK2Q92608 1830 aa25.86■■□□□ 1.73
SMPD1-204ENST00000530395 CETPP11597 493 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 SP3Q02447 781 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 RASGRF1Q13972 1273 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 SPTY2D1Q68D10 685 aaPredicted RBP25.85■■□□□ 1.73
SMPD1-204ENST00000530395 MIGA2Q7L4E1 593 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 SLF2Q8IX21 1173 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 XAGE2Q96GT9 111 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 ZFYVE28Q9HCC9 887 aa25.85■■□□□ 1.73
SMPD1-204ENST00000530395 HNRNPUQ00839 825 aaKnown RBP eCLIP25.84■■□□□ 1.73
SMPD1-204ENST00000530395 NFIAQ12857 509 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 PPIL2Q13356 520 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 SNAPC2Q13487 334 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 ZKSCAN2Q63HK3 967 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 CD99L2Q8TCZ2 262 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 ABCF2Q9UG63 623 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 TNNQ9UQP3 1299 aa25.84■■□□□ 1.73
SMPD1-204ENST00000530395 NEUROD6Q96NK8 337 aa25.83■■□□□ 1.73
SMPD1-204ENST00000530395 PPATQ06203 517 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 G3BP1Q13283 466 aaKnown RBP eCLIP25.82■■□□□ 1.72
SMPD1-204ENST00000530395 GORABQ5T7V8 394 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 FAM43AQ8N2R8 423 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 EFCC1Q9HA90 598 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 ZCCHC17Q9NP64 241 aaKnown RBP25.82■■□□□ 1.72
SMPD1-204ENST00000530395 FAM198AQ9UFP1 575 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 GAKO14976 1311 aa25.82■■□□□ 1.72
SMPD1-204ENST00000530395 CENPFP49454 3210 aa25.81■■□□□ 1.72
SMPD1-204ENST00000530395 IRF6O14896 467 aa25.81■■□□□ 1.72
SMPD1-204ENST00000530395 ARHGEF6Q15052 776 aa25.81■■□□□ 1.72
SMPD1-204ENST00000530395 INPP5BP32019 993 aa25.8■■□□□ 1.72
SMPD1-204ENST00000530395 TMEM57Q8N5G2 664 aa25.8■■□□□ 1.72
SMPD1-204ENST00000530395 ZNF112Q9UJU3 913 aa25.8■■□□□ 1.72
SMPD1-204ENST00000530395 PNMA6EA0A0J9YXQ4 647 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 ENTPD3O75355 529 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 RGS3P49796 1198 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 MIER1Q8N108 512 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 IDI2Q9BXS1 227 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 PTPN22Q9Y2R2 807 aa25.79■■□□□ 1.72
SMPD1-204ENST00000530395 DIEXFQ68CQ4 756 aaKnown RBP25.78■■□□□ 1.72
SMPD1-204ENST00000530395 FTSJ3Q8IY81 847 aaKnown RBP25.78■■□□□ 1.72
SMPD1-204ENST00000530395 FAM163AQ96GL9 167 aaPredicted RBP25.78■■□□□ 1.72
SMPD1-204ENST00000530395 MROH7-TTC4A0A0A0MT08 1334 aa25.78■■□□□ 1.72
SMPD1-204ENST00000530395 BTBD19C9JJ37 291 aa25.77■■□□□ 1.72
SMPD1-204ENST00000530395 RFX7Q2KHR2 1363 aa25.77■■□□□ 1.72
SMPD1-204ENST00000530395 BTDP43251 543 aa25.76■■□□□ 1.71
SMPD1-204ENST00000530395 NOL9Q5SY16 702 aaKnown RBP25.76■■□□□ 1.71
SMPD1-204ENST00000530395 ZSCAN29Q8IWY8 852 aaPredicted RBP25.76■■□□□ 1.71
SMPD1-204ENST00000530395 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.76■■□□□ 1.71
SMPD1-204ENST00000530395 SPATA5Q8NB90 893 aa25.76■■□□□ 1.71
SMPD1-204ENST00000530395 HMG20BQ9P0W2 317 aa25.76■■□□□ 1.71
SMPD1-204ENST00000530395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.76■■□□□ 1.71
SMPD1-204ENST00000530395 TLR2O60603 784 aa25.75■■□□□ 1.71
SMPD1-204ENST00000530395 GSTO1P78417 241 aa25.75■■□□□ 1.71
SMPD1-204ENST00000530395 MECOMQ03112 1051 aa25.75■■□□□ 1.71
SMPD1-204ENST00000530395 ZFPM1Q8IX07 1006 aa25.75■■□□□ 1.71
SMPD1-204ENST00000530395 RBBP6Q7Z6E9 1792 aaKnown RBP25.74■■□□□ 1.71
SMPD1-204ENST00000530395 ATRNL1Q5VV63 1379 aa25.74■■□□□ 1.71
SMPD1-204ENST00000530395 ARID4AP29374 1257 aaPredicted RBP25.74■■□□□ 1.71
SMPD1-204ENST00000530395 OS9Q13438 667 aaPredicted RBP25.74■■□□□ 1.71
SMPD1-204ENST00000530395 KIF22Q14807 665 aa25.74■■□□□ 1.71
SMPD1-204ENST00000530395 KCNH4Q9UQ05 1017 aa25.74■■□□□ 1.71
SMPD1-204ENST00000530395 LDHCP07864 332 aa25.73■■□□□ 1.71
SMPD1-204ENST00000530395 UQCRFS1P1P0C7P4 283 aa25.73■■□□□ 1.71
SMPD1-204ENST00000530395 PICALMQ13492 652 aa25.73■■□□□ 1.71
SMPD1-204ENST00000530395 DOCK1Q14185 1865 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms