RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TEKT1Q969V4 418 aa12.77□□□□□ -0.37
SOX6-213ENST00000530378 SLC4A4Q9Y6R1 1079 aa12.77□□□□□ -0.37
SOX6-213ENST00000530378 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.37
SOX6-213ENST00000530378 FOXP2O15409 715 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 CACNB3P54284 484 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 GMLQ99445 158 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 GAKO14976 1311 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 FOCADQ5VW36 1801 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 DDNO94850 711 aaPredicted RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 LDHCP07864 332 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 EPB41L4AQ9HCS5 686 aaPredicted RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 SUGT1Q9Y2Z0 365 aa12.76□□□□□ -0.37
SOX6-213ENST00000530378 RBM8AQ9Y5S9 174 aaKnown RBP12.76□□□□□ -0.37
SOX6-213ENST00000530378 MYH1P12882 1939 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 EGFRP00533 1210 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 TEX11Q8IYF3 940 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 USP26Q9BXU7 913 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 LAMA4Q16363 1823 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 LAMB1P07942 1786 aa12.75□□□□□ -0.37
SOX6-213ENST00000530378 HAND2P61296 217 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 PICALMQ13492 652 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
SOX6-213ENST00000530378 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 SLF2Q8IX21 1173 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 GPR75-ASB3A0A0A6YYF3 556 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 BAG3O95817 575 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 TDO2P48775 406 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 EVX2Q03828 476 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 APOBEC3HQ6NTF7 200 aaKnown RBP12.74□□□□□ -0.37
SOX6-213ENST00000530378 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 TICAM2Q86XR7 235 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
SOX6-213ENST00000530378 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
SOX6-213ENST00000530378 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
SOX6-213ENST00000530378 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
SOX6-213ENST00000530378 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 USP5P45974 858 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 RHBDL3P58872 404 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 GPC2Q8N158 579 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 PRMT6Q96LA8 375 aaPredicted RBP12.73□□□□□ -0.37
SOX6-213ENST00000530378 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
SOX6-213ENST00000530378 MYOZ2Q9NPC6 264 aa12.73□□□□□ -0.37
SOX6-213ENST00000530378 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
SOX6-213ENST00000530378 DDX60LQ5H9U9 1706 aaKnown RBP12.73□□□□□ -0.37
SOX6-213ENST00000530378 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
SOX6-213ENST00000530378 NFIAQ12857 509 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 ZDHHC15Q96MV8 337 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 NAPBQ9H115 298 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 FGAP02671 866 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 CYP2D6P10635 497 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
SOX6-213ENST00000530378 EPS15P42566 896 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 IFNL3Q8IZI9 196 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
SOX6-213ENST00000530378 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
SOX6-213ENST00000530378 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
SOX6-213ENST00000530378 FLT1P17948 1338 aa12.71□□□□□ -0.37
SOX6-213ENST00000530378 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.38
SOX6-213ENST00000530378 SLC27A2O14975 620 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 PPP4CP60510 307 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 TCP10Q12799 353 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.38
SOX6-213ENST00000530378 GPRC5DQ9NZD1 345 aa12.71□□□□□ -0.38
SOX6-213ENST00000530378 CEP350Q5VT06 3117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms