RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
CAPRIN1-208ENST00000530008 PCDHB14Q9Y5E9 798 aa9.2□□□□□ -0.94
CAPRIN1-208ENST00000530008 CDC45O75419 566 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 TRIM37O94972 964 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 CASP7P55210 303 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 IKBKEQ14164 716 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 FXNQ16595 210 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 LARP1BQ659C4 914 aaKnown RBP9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 PDZD3Q86UT5 571 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 LPIN3Q9BQK8 851 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 FANCLQ9NW38 375 aa9.19□□□□□ -0.94
CAPRIN1-208ENST00000530008 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 CDC14CA4D256 554 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 FAM177BA6PVY3 158 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 ATE1O95260 518 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 ADH7P40394 386 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 IGBP1P78318 339 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 BRINP2Q9C0B6 783 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 FRRS1LQ9P0K9 344 aa9.18□□□□□ -0.94
CAPRIN1-208ENST00000530008 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 GSTP1P09211 210 aaKnown RBP9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 CDC27P30260 824 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 CABP4P57796 275 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 MAP1SQ66K74 1059 aaPredicted RBP9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 VWA5B2Q8N398 1253 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 ZCRB1Q8TBF4 217 aaKnown RBP9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 MICAL1Q8TDZ2 1067 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 APPBP2Q92624 585 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 TRIM47Q96LD4 638 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 KLF15Q9UIH9 416 aa9.17□□□□□ -0.94
CAPRIN1-208ENST00000530008 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 SOX1O00570 391 aaPredicted RBP9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 EPHA1P21709 976 aa9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 FILIP1Q7Z7B0 1213 aa9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 C19orf47Q8N9M1 422 aaKnown RBP9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
CAPRIN1-208ENST00000530008 ESYT3A0FGR9 886 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 GJB6O95452 261 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 GDF6Q6KF10 455 aaPredicted RBP9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 RUFY4Q6ZNE9 571 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 SV2AQ7L0J3 742 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 TTC9Q92623 222 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 SLKQ9H2G2 1235 aaPredicted RBP9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 CACNA2D2Q9NY47 1150 aa9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 NOP58Q9Y2X3 529 aaKnown RBP9.15□□□□□ -0.94
CAPRIN1-208ENST00000530008 H3BRJ5 948 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 DNAJC6O75061 913 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 PPFIA3O75145 1194 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 ARAFP10398 606 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 ADH6P28332 368 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 CACTIN-AS1Q8N1I8 211 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 MDFIQ99750 246 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 SOX17Q9H6I2 414 aaPredicted RBP9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 ANTXR1Q9H6X2 564 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 SPC25Q9HBM1 224 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 COL4A3BPQ9Y5P4 624 aa9.14□□□□□ -0.95
CAPRIN1-208ENST00000530008 A0A1W2PQH9 124 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 MEIS3P2A8K0S8 358 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 SELPP16109 830 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 CDK8P49336 464 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 ANAPC15P60006 121 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 GSTM4Q03013 218 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 LRRFIP1Q32MZ4 808 aaKnown RBP9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 MTERF2Q49AM1 385 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 PSAPL1Q6NUJ1 521 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 TMEM260Q9NX78 707 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 PCDHA4Q9UN74 947 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 PRKAB1Q9Y478 270 aa9.13□□□□□ -0.95
CAPRIN1-208ENST00000530008 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 B2RBV5 119 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 GFRA2O00451 464 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 RAB11FIP3O75154 756 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 DDAH1O94760 285 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 MX2P20592 715 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 KIAA0907Q7Z7F0 614 aaPredicted RBP9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 GPBAR1Q8TDU6 330 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 TM9SF2Q99805 663 aa9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
CAPRIN1-208ENST00000530008 HTR3BO95264 441 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 GUCY2CP25092 1073 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 CDC25BP30305 580 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 C2orf27AQ580R0 203 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 FCHSD1Q86WN1 690 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 FAM178BQ8IXR5 827 aa9.11□□□□□ -0.95
CAPRIN1-208ENST00000530008 THAP3Q8WTV1 239 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms