RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 A0A1B0GUL6 1792 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
VPS11-203ENST00000529545 TLR2O60603 784 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 CRKP46108 304 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
VPS11-203ENST00000529545 SNAPC2Q13487 334 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 UBE4AQ14139 1066 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS11-203ENST00000529545 SH3TC2Q8TF17 1288 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 DPF3Q92784 378 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 TEPSINQ96N21 525 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 HTTP42858 3142 aa11.39□□□□□ -0.59
VPS11-203ENST00000529545 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
VPS11-203ENST00000529545 HOXD10P28358 340 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 GYG1P46976 350 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 CCDC27Q2M243 656 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 NKX2-3Q8TAU0 364 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
VPS11-203ENST00000529545 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 ARAP2Q8WZ64 1704 aa11.38□□□□□ -0.59
VPS11-203ENST00000529545 IL16Q14005 1332 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 GRM8O00222 908 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
VPS11-203ENST00000529545 DCAF15Q66K64 600 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 WRNIP1Q96S55 665 aa11.37□□□□□ -0.59
VPS11-203ENST00000529545 C9orf78Q9NZ63 289 aaPredicted RBP11.37□□□□□ -0.59
VPS11-203ENST00000529545 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
VPS11-203ENST00000529545 PPIL2Q13356 520 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 CAVIN4Q5BKX8 364 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 BEND3Q5T5X7 828 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 RAET1EQ8TD07 263 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 FAM84BQ96KN1 310 aaPredicted RBP11.36□□□□□ -0.59
VPS11-203ENST00000529545 HTATIP2Q9BUP3 242 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 ARHGAP39Q9C0H5 1083 aa11.36□□□□□ -0.59
VPS11-203ENST00000529545 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
VPS11-203ENST00000529545 CEP290O15078 2479 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 F6X3S4 739 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 IRF6O14896 467 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
VPS11-203ENST00000529545 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
VPS11-203ENST00000529545 PSMC4P43686 418 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 FAM83AQ86UY5 434 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 ZKSCAN4Q969J2 545 aaPredicted RBP11.35□□□□□ -0.59
VPS11-203ENST00000529545 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 SRRDQ9UH36 339 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 NR2E3Q9Y5X4 410 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
VPS11-203ENST00000529545 MAST3O60307 1309 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
VPS11-203ENST00000529545 GRK4P32298 578 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 CACNB3P54284 484 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 UBXN2AP68543 259 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 PPATQ06203 517 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 MTFR1Q15390 333 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 EPHA10Q5JZY3 1008 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 FKBP1CQ5VVH2 108 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 C17orf99Q6UX52 265 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 CPA4Q9UI42 421 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
VPS11-203ENST00000529545 CENPFP49454 3210 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
VPS11-203ENST00000529545 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 VAMP4O75379 141 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 GJB1P08034 283 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
VPS11-203ENST00000529545 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
VPS11-203ENST00000529545 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
VPS11-203ENST00000529545 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
VPS11-203ENST00000529545 PDHXO00330 501 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 CCL5P13501 91 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 OSBPP22059 807 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 GJA8P48165 433 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
VPS11-203ENST00000529545 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 SLC4A10Q6U841 1118 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 SHISA4Q96DD7 197 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
VPS11-203ENST00000529545 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
VPS11-203ENST00000529545 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms