RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 WDHD1O75717 1129 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 ZKSCAN2Q63HK3 967 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 SPTY2D1Q68D10 685 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 FAM83AQ86UY5 434 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 MIER1Q8N108 512 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 MCOLN1Q9GZU1 580 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 SIL1Q9H173 461 aa9.7□□□□□ -0.86
CCDC90B-212ENST00000529312 TCP10L2B9ZVM9 353 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 TBC1D8O95759 1140 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 LDHBP07195 334 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 MS4A1P11836 297 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 HNRNPUQ00839 825 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 MTX1Q13505 466 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 GORABQ5T7V8 394 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 DCAF15Q66K64 600 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 CTU1Q7Z7A3 348 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 COLQQ9Y215 455 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 PCDHAC2Q9Y5I4 1007 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 CSADQ9Y600 493 aa9.69□□□□□ -0.86
CCDC90B-212ENST00000529312 PAPPA2Q9BXP8 1791 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 GPR25O00155 361 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 FKTNO75072 461 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 BCAR3O75815 825 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 SEC24BO95487 1268 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 LDHCP07864 332 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 WNK4Q96J92 1243 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 NEUROD6Q96NK8 337 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 MEIS3Q99687 375 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 TRPC6Q9Y210 931 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
CCDC90B-212ENST00000529312 SALL1Q9NSC2 1324 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 TRIM27P14373 513 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 RGS19P49795 217 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 GTF2A2P52657 109 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 TIMM10P62072 90 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 ATP8B2P98198 1209 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 IER5LQ5T953 404 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 FAM151AQ8WW52 585 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 TEPSINQ96N21 525 aa9.67□□□□□ -0.86
CCDC90B-212ENST00000529312 AKAP11Q9UKA4 1901 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 ST18O60284 1047 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 IGSF3O75054 1194 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 FTSJ3Q8IY81 847 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 CLUAP1Q96AJ1 413 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 ZNF341Q9BYN7 854 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 TMEM39BQ9GZU3 492 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 USP40Q9NVE5 1235 aa9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-212ENST00000529312 PDS5AQ29RF7 1337 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 THSD7BQ9C0I4 1608 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 A0A1B0GUL7 405 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 MAP3K13O43283 966 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 UQCRFS1P1P0C7P4 283 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 PHKA1P46020 1223 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 GSTO1P78417 241 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 MLLT1Q03111 559 aaPredicted RBP9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 TFCP2Q12800 502 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 MMRN1Q13201 1228 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 GRIK5Q16478 980 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 CCDC158Q5M9N0 1113 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ERICH6Q7L0X2 663 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ERO1BQ86YB8 467 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 OPTNQ96CV9 577 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ERO1AQ96HE7 468 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 CLMNQ96JQ2 1002 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ELP3Q9H9T3 547 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 GPR108Q9NPR9 543 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 ABCF2Q9UG63 623 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 PCNTO95613 3336 aa9.65□□□□□ -0.86
CCDC90B-212ENST00000529312 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 ENTPD3O75355 529 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 CETPP11597 493 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 OS9Q13438 667 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 CDC42EP5Q6NZY7 148 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 DZIP1Q86YF9 867 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 FZD1Q9UP38 647 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 DAGLAQ9Y4D2 1042 aa9.64□□□□□ -0.87
CCDC90B-212ENST00000529312 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-212ENST00000529312 CACNB3P54284 484 aa9.63□□□□□ -0.87
CCDC90B-212ENST00000529312 PPATQ06203 517 aa9.63□□□□□ -0.87
CCDC90B-212ENST00000529312 SNAPC2Q13487 334 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms