RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 AIDAQ96BJ3 306 aa27.42■■□□□ 1.98
LTBP3-212ENST00000529189 DBNDD1Q9H9R9 158 aa27.42■■□□□ 1.98
LTBP3-212ENST00000529189 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
LTBP3-212ENST00000529189 KIAA2012Q0VF49 1180 aa27.41■■□□□ 1.98
LTBP3-212ENST00000529189 WDR66Q8TBY9 1149 aa27.41■■□□□ 1.98
LTBP3-212ENST00000529189 STX6O43752 255 aa27.4■■□□□ 1.98
LTBP3-212ENST00000529189 SYT1P21579 422 aa27.4■■□□□ 1.98
LTBP3-212ENST00000529189 SALL1Q9NSC2 1324 aa27.4■■□□□ 1.98
LTBP3-212ENST00000529189 PPIP5K2O43314 1243 aa27.4■■□□□ 1.98
LTBP3-212ENST00000529189 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
LTBP3-212ENST00000529189 PRDX5P30044 214 aa27.39■■□□□ 1.98
LTBP3-212ENST00000529189 HAND2P61296 217 aa27.39■■□□□ 1.98
LTBP3-212ENST00000529189 BRF1Q92994 677 aa27.39■■□□□ 1.98
LTBP3-212ENST00000529189 LRRC2Q9BYS8 371 aa27.39■■□□□ 1.98
LTBP3-212ENST00000529189 GZF1Q9H116 711 aaPredicted RBP27.39■■□□□ 1.98
LTBP3-212ENST00000529189 ZNF277Q9NRM2 450 aaPredicted RBP27.39■■□□□ 1.98
LTBP3-212ENST00000529189 MAST2Q6P0Q8 1798 aa27.39■■□□□ 1.97
LTBP3-212ENST00000529189 ZNF213O14771 459 aa27.39■■□□□ 1.97
LTBP3-212ENST00000529189 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.97
LTBP3-212ENST00000529189 STRBPQ96SI9 672 aaKnown RBP27.39■■□□□ 1.97
LTBP3-212ENST00000529189 AGXT2Q9BYV1 514 aa27.39■■□□□ 1.97
LTBP3-212ENST00000529189 LMBRD1Q9NUN5 540 aa27.39■■□□□ 1.97
LTBP3-212ENST00000529189 SRCAPQ6ZRS2 3230 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 ECE2O60344 883 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 GTF2IP78347 998 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 STK3Q13188 491 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 GTF3C6Q969F1 213 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 FAM205AQ6ZU69 1335 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 ARFGEF1Q9Y6D6 1849 aa27.38■■□□□ 1.97
LTBP3-212ENST00000529189 FBXW7Q969H0 707 aa27.37■■□□□ 1.97
LTBP3-212ENST00000529189 MBD4O95243 580 aa27.37■■□□□ 1.97
LTBP3-212ENST00000529189 APPP05067 770 aa27.37■■□□□ 1.97
LTBP3-212ENST00000529189 GRIK5Q16478 980 aa27.36■■□□□ 1.97
LTBP3-212ENST00000529189 PODNQ7Z5L7 613 aa27.36■■□□□ 1.97
LTBP3-212ENST00000529189 ZNF384Q8TF68 577 aa27.36■■□□□ 1.97
LTBP3-212ENST00000529189 ZMYM6O95789 1325 aa27.36■■□□□ 1.97
LTBP3-212ENST00000529189 SCN9AQ15858 1988 aa27.36■■□□□ 1.97
LTBP3-212ENST00000529189 CCDC88AQ3V6T2 1871 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 PDIA4P13667 645 aaKnown RBP27.35■■□□□ 1.97
LTBP3-212ENST00000529189 MECOMQ03112 1051 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 ALX1Q15699 326 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 MFSD14BQ5SR56 506 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 SPTY2D1Q68D10 685 aaPredicted RBP27.35■■□□□ 1.97
LTBP3-212ENST00000529189 TAOK3Q9H2K8 898 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 DDX49Q9Y6V7 483 aaKnown RBP27.35■■□□□ 1.97
LTBP3-212ENST00000529189 COL4A5P29400 1685 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 CYP7A1P22680 504 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 KLHL40Q2TBA0 621 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 NSUN4Q96CB9 384 aaKnown RBP27.35■■□□□ 1.97
LTBP3-212ENST00000529189 SYT17Q9BSW7 474 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 KCNQ5Q9NR82 932 aa27.35■■□□□ 1.97
LTBP3-212ENST00000529189 NFKBIEO00221 500 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 SOCS7O14512 581 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 LDHBP07195 334 aaKnown RBP27.34■■□□□ 1.97
LTBP3-212ENST00000529189 NAA16Q6N069 864 aaPredicted RBP27.34■■□□□ 1.97
LTBP3-212ENST00000529189 ADGRA1Q86SQ6 560 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 NCOA7Q8NI08 942 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 TBC1D22AQ8WUA7 517 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 CHAMP1Q96JM3 812 aa27.34■■□□□ 1.97
LTBP3-212ENST00000529189 PATL2C9JE40 543 aaKnown RBP27.33■■□□□ 1.97
LTBP3-212ENST00000529189 PRPF40AO75400 957 aaKnown RBP27.33■■□□□ 1.97
LTBP3-212ENST00000529189 PDCP20941 246 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 RALYLQ86SE5 291 aaKnown RBP27.33■■□□□ 1.97
LTBP3-212ENST00000529189 DZIP1Q86YF9 867 aaKnown RBP27.33■■□□□ 1.97
LTBP3-212ENST00000529189 LARGE2Q8N3Y3 721 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 FBXL16Q8N461 479 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 ARMT1Q9H993 441 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 PFKFB2O60825 505 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 F13A1P00488 732 aa27.33■■□□□ 1.97
LTBP3-212ENST00000529189 MB21D2Q8IYB1 491 aaPredicted RBP27.33■■□□□ 1.97
LTBP3-212ENST00000529189 GNAT2P19087 354 aa27.32■■□□□ 1.96
LTBP3-212ENST00000529189 MCM5P33992 734 aa27.32■■□□□ 1.96
LTBP3-212ENST00000529189 APOBRQ0VD83 1088 aa27.32■■□□□ 1.96
LTBP3-212ENST00000529189 MTMR6Q9Y217 621 aa27.32■■□□□ 1.96
LTBP3-212ENST00000529189 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 FSD2A1L4K1 749 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 IARSP41252 1262 aaKnown RBP27.31■■□□□ 1.96
LTBP3-212ENST00000529189 MIGA1Q8NAN2 632 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 MXD3Q9BW11 206 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 ZNF646O15015 1829 aaPredicted RBP27.31■■□□□ 1.96
LTBP3-212ENST00000529189 DTNBO60941 627 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 LARP1BQ659C4 914 aaKnown RBP27.31■■□□□ 1.96
LTBP3-212ENST00000529189 CHST3Q7LGC8 479 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 NBPF3Q9H094 633 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 ATP6V1DQ9Y5K8 247 aa27.31■■□□□ 1.96
LTBP3-212ENST00000529189 YDJCA8MPS7 323 aa27.3■■□□□ 1.96
LTBP3-212ENST00000529189 CERS5Q8N5B7 392 aa27.3■■□□□ 1.96
LTBP3-212ENST00000529189 VPS33BQ9H267 617 aa27.3■■□□□ 1.96
LTBP3-212ENST00000529189 PRC1O43663 620 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 TRDNQ13061 729 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 IFNL3Q8IZI9 196 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 LCORLQ8N3X6 602 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 LLPHQ9BRT6 129 aaKnown RBP27.29■■□□□ 1.96
LTBP3-212ENST00000529189 NAPBQ9H115 298 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 EPB41L4AQ9HCS5 686 aaPredicted RBP27.29■■□□□ 1.96
LTBP3-212ENST00000529189 TCHHQ07283 1943 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 TIAM2Q8IVF5 1701 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 VPS37CA5D8V6 355 aaPredicted RBP27.29■■□□□ 1.96
LTBP3-212ENST00000529189 RASSF7Q02833 373 aa27.29■■□□□ 1.96
LTBP3-212ENST00000529189 SCRN1Q12765 414 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms