RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SERPINA10Q9UK55 444 aa29.6■■■□□ 2.33
LDLRAD3-203ENST00000528989 RBM8AQ9Y5S9 174 aaKnown RBP29.6■■■□□ 2.33
LDLRAD3-203ENST00000528989 GSG1L2A8MUP6 293 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 OGFOD1Q8N543 542 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 DSCC1Q9BVC3 393 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 DICER1Q9UPY3 1922 aaKnown RBP29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 BAG3O95817 575 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 CFAP100Q494V2 611 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 ZDHHC15Q96MV8 337 aa29.59■■■□□ 2.33
LDLRAD3-203ENST00000528989 ADAMTSL1Q8N6G6 1762 aa29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 PATL2C9JE40 543 aaKnown RBP29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 DDNO94850 711 aaPredicted RBP29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 RHBDL3P58872 404 aa29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 HDLBPQ00341 1268 aaKnown RBP29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 NOL10Q9BSC4 688 aaKnown RBP29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 EPB41L4AQ9HCS5 686 aaPredicted RBP29.58■■■□□ 2.33
LDLRAD3-203ENST00000528989 EIF5BO60841 1220 aaKnown RBP29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 FGAP02671 866 aa29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 PRMT6Q96LA8 375 aaPredicted RBP29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 TBC1D32Q96NH3 1257 aa29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 GPC2Q8N158 579 aa29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 PALD1Q9ULE6 856 aa29.57■■■□□ 2.32
LDLRAD3-203ENST00000528989 EGFRP00533 1210 aa29.56■■■□□ 2.32
LDLRAD3-203ENST00000528989 RPS12P25398 132 aaKnown RBP29.56■■■□□ 2.32
LDLRAD3-203ENST00000528989 NECTIN1Q15223 517 aa29.56■■■□□ 2.32
LDLRAD3-203ENST00000528989 HDAC9Q9UKV0 1011 aa29.56■■■□□ 2.32
LDLRAD3-203ENST00000528989 GNAT2P19087 354 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 CDC42EP5Q6NZY7 148 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 IFNL3Q8IZI9 196 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 CNOT7Q9UIV1 285 aaKnown RBP29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 HSPA4P34932 840 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 MICALL2Q8IY33 904 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 DPF2Q92785 391 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 CRNKL1Q9BZJ0 848 aaKnown RBP29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 USP40Q9NVE5 1235 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 TAF6LQ9Y6J9 622 aa29.55■■■□□ 2.32
LDLRAD3-203ENST00000528989 TGFBRAP1Q8WUH2 860 aa29.54■■■□□ 2.32
LDLRAD3-203ENST00000528989 RBM26Q5T8P6 1007 aaKnown RBP29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 RASEFQ8IZ41 740 aa29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 EPB41L2O43491 1005 aaKnown RBP29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 RBM25P49756 843 aaKnown RBP29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 CACNB3P54284 484 aa29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 SAMD7Q7Z3H4 446 aa29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 TEX11Q8IYF3 940 aa29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 TDRD3Q9H7E2 651 aaKnown RBP29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 MYOZ2Q9NPC6 264 aa29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 U3KPZ7 1027 aaPredicted RBP29.53■■■□□ 2.32
LDLRAD3-203ENST00000528989 ZNF280AP59817 542 aaPredicted RBP29.52■■■□□ 2.32
LDLRAD3-203ENST00000528989 DLGAP5Q15398 846 aa29.52■■■□□ 2.32
LDLRAD3-203ENST00000528989 DCP1AQ9NPI6 582 aaPredicted RBP29.52■■■□□ 2.32
LDLRAD3-203ENST00000528989 SPDYE2BA6NHP3 402 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 SPDYE6P0CI01 402 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 CREB3L3Q68CJ9 461 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 SMIM22K7EJ46 135 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 SLC27A2O14975 620 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 CYP21A2P08686 494 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 PLCG2P16885 1265 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 USP5P45974 858 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 HAND2P61296 217 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 MAPKAPK5Q8IW41 473 aa29.51■■■□□ 2.31
LDLRAD3-203ENST00000528989 TIAM2Q8IVF5 1701 aa29.5■■■□□ 2.31
LDLRAD3-203ENST00000528989 WDHD1O75717 1129 aaPredicted RBP29.5■■■□□ 2.31
LDLRAD3-203ENST00000528989 NBPF9Q3BBW0 867 aa29.5■■■□□ 2.31
LDLRAD3-203ENST00000528989 NAPBQ9H115 298 aa29.5■■■□□ 2.31
LDLRAD3-203ENST00000528989 MKRN1Q9UHC7 482 aaKnown RBP29.5■■■□□ 2.31
LDLRAD3-203ENST00000528989 EPS15P42566 896 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 TDO2P48775 406 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 NFIAQ12857 509 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 SLC4A8Q2Y0W8 1093 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 KIF2CQ99661 725 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 NACAP1Q9BZK3 213 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 DDX4Q9NQI0 724 aaKnown RBP29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 GPRC5DQ9NZD1 345 aa29.49■■■□□ 2.31
LDLRAD3-203ENST00000528989 EVX2Q03828 476 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 PICALMQ13492 652 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 ALX1Q15699 326 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 TBC1D10BQ4KMP7 808 aaPredicted RBP29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 ATP8A2Q9NTI2 1148 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 CYP2D7A0A087X1C5 515 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 WNT10BO00744 389 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 CERS3Q8IU89 383 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 SNX14Q9Y5W7 946 aa29.48■■■□□ 2.31
LDLRAD3-203ENST00000528989 CLRN2A0PK11 232 aa29.47■■■□□ 2.31
LDLRAD3-203ENST00000528989 MCCP23508 829 aa29.47■■■□□ 2.31
LDLRAD3-203ENST00000528989 DPY19L2Q6NUT2 758 aa29.47■■■□□ 2.31
LDLRAD3-203ENST00000528989 ZBED3Q96IU2 234 aaPredicted RBP29.47■■■□□ 2.31
LDLRAD3-203ENST00000528989 USP17L12C9JPN9 530 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 USP17L21D6R901 530 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 CTR9Q6PD62 1173 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 MTMR14Q8NCE2 650 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 CTNNA3Q9UI47 895 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 FLT1P17948 1338 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 MCM9Q9NXL9 1143 aa29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 SAP30BPQ9UHR5 308 aaKnown RBP29.46■■■□□ 2.31
LDLRAD3-203ENST00000528989 RPAP1Q9BWH6 1393 aaPredicted RBP29.45■■■□□ 2.31
LDLRAD3-203ENST00000528989 H7C1D1 291 aa29.45■■■□□ 2.31
LDLRAD3-203ENST00000528989 ZFPM1Q8IX07 1006 aa29.45■■■□□ 2.31
LDLRAD3-203ENST00000528989 KCNB2Q92953 911 aa29.45■■■□□ 2.31
LDLRAD3-203ENST00000528989 MINDY4BA8MYZ0 360 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 CYP2D6P10635 497 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms