RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF697Q5TEC3 545 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 TSPYL6Q8N831 410 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 DBF4Q9UBU7 674 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 ZMYND8Q9ULU4 1186 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 SALL2Q9Y467 1007 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 SGPL1O95470 568 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 GJA5P36382 358 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 WDR63Q8IWG1 891 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 GMLQ99445 158 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
SSBP3-212ENST00000528930 C1QTNF1Q9BXJ1 281 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
SSBP3-212ENST00000528930 RNF208Q9H0X6 261 aa10.89□□□□□ -0.67
SSBP3-212ENST00000528930 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
SSBP3-212ENST00000528930 LACTBP83111 547 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-212ENST00000528930 PARP10Q53GL7 1025 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 Q6ZNB5 142 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 C7orf61Q8IZ16 206 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 CLMNQ96JQ2 1002 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
SSBP3-212ENST00000528930 HYPKQ9NX55 129 aa10.88□□□□□ -0.67
SSBP3-212ENST00000528930 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 UNCXA6NJT0 531 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 GRK4P32298 578 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 PRKG1Q13976 671 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 HSP90AB3PQ58FF7 597 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 SLC10A5Q5PT55 438 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-212ENST00000528930 PPP1R42Q7Z4L9 355 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 PLBD2Q8NHP8 589 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
SSBP3-212ENST00000528930 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-212ENST00000528930 NBPF9Q3BBW0 867 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 MYLIPQ8WY64 445 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 ISCA1Q9BUE6 129 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
SSBP3-212ENST00000528930 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
SSBP3-212ENST00000528930 TCF20Q9UGU0 1960 aaKnown RBP10.86□□□□□ -0.67
SSBP3-212ENST00000528930 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 MAST2Q6P0Q8 1798 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 DPYSL4O14531 572 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 SYN1P17600 705 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 GRAPQ13588 217 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 TWISTNBQ3B726 338 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-212ENST00000528930 CCDC30Q5VVM6 783 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 GRAPLQ8TC17 118 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-212ENST00000528930 SRRDQ9UH36 339 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 RIPOR2Q9Y4F9 1068 aa10.85□□□□□ -0.67
SSBP3-212ENST00000528930 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 VAMP4O75379 141 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 CTGFP29279 349 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 KCNC4Q03721 635 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
SSBP3-212ENST00000528930 KIF22Q14807 665 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 USP38Q8NB14 1042 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 ADAMTS19Q8TE59 1207 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 PAWRQ96IZ0 340 aaKnown RBP10.84□□□□□ -0.67
SSBP3-212ENST00000528930 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 POLLQ9UGP5 575 aa10.84□□□□□ -0.67
SSBP3-212ENST00000528930 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 WNT10BO00744 389 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 FOSL2P15408 326 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 UBXN2AP68543 259 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
SSBP3-212ENST00000528930 RIC3Q7Z5B4 369 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
SSBP3-212ENST00000528930 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
SSBP3-212ENST00000528930 TRIM6-TRIM34B2RNG4 842 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 TLR2O60603 784 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-212ENST00000528930 MRE11P49959 708 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 G2E3Q7L622 706 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 NECAB2Q7Z6G3 386 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 APOBEC3FQ8IUX4 373 aaKnown RBP10.82□□□□□ -0.68
SSBP3-212ENST00000528930 DIS3LQ8TF46 1054 aaKnown RBP10.82□□□□□ -0.68
SSBP3-212ENST00000528930 DDX12PQ92771 950 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 SH3TC1Q8TE82 1336 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 ADGRA2Q96PE1 1338 aa10.82□□□□□ -0.68
SSBP3-212ENST00000528930 DOCK3Q8IZD9 2030 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 OSBPP22059 807 aa10.81□□□□□ -0.68
SSBP3-212ENST00000528930 FAM43AQ8N2R8 423 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms