RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 RAB11FIP3O75154 756 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 TNNI3KQ59H18 835 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 STRIP1Q5VSL9 837 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 PI16Q6UXB8 463 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 FPGT-TNNI3KV9GXZ4 949 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 LAMB1P07942 1786 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 MYH7P12883 1935 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 IGF2BP3O00425 579 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 IFIT1P09914 478 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 USP17L8P0C7I0 530 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 PRKG1Q13976 671 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 LPIN2Q92539 896 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 LRRCC1Q9C099 1032 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 AKAP2Q9Y2D5 859 aa14.18□□□□□ -0.14
CCDC90B-210ENST00000528149 NF2P35240 595 aa14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 AACSQ86V21 672 aa14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 SMC5Q8IY18 1101 aa14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 EAF2Q96CJ1 260 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
CCDC90B-210ENST00000528149 FAM205AQ6ZU69 1335 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 MANSC4A6NHS7 340 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 MYCP01106 439 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 CRHR2Q13324 411 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 SLC4A8Q2Y0W8 1093 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 MFSD14BQ5SR56 506 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 DBNDD2Q9BQY9 259 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 CCDC8Q9H0W5 538 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 PRO3102Q9H379 93 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 DBNLQ9UJU6 430 aaKnown RBP14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 UNC80Q8N2C7 3258 aa14.16□□□□□ -0.14
CCDC90B-210ENST00000528149 DOCK2Q92608 1830 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 MAST2Q6P0Q8 1798 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 CLRN2A0PK11 232 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 SLC9C1Q4G0N8 1177 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 ARMC9Q7Z3E5 817 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 CLASRPQ8N2M8 674 aaKnown RBP14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 ZBED3Q96IU2 234 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 NDUFB9Q9Y6M9 179 aa14.15□□□□□ -0.14
CCDC90B-210ENST00000528149 ECM29Q5VYK3 1845 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 WNT10BO00744 389 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 PRDX5P30044 214 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 RASGRF1Q13972 1273 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 VPS37DQ86XT2 251 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 LNPKQ9C0E8 428 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 ANGEL1Q9UNK9 670 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
CCDC90B-210ENST00000528149 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 SOX1O00570 391 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 IFIT2P09913 472 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 CACNB3P54284 484 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 INHBEP58166 350 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 SP3Q02447 781 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 CFAP100Q494V2 611 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 PRMT6Q96LA8 375 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-210ENST00000528149 MYH2Q9UKX2 1941 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 NUCB1Q02818 461 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 DIXDC1Q155Q3 683 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 TBC1D9Q6ZT07 1266 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 ZNF384Q8TF68 577 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 DPF3Q92784 378 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 WNK4Q96J92 1243 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 CLMNQ96JQ2 1002 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 SNRKQ9NRH2 765 aa14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 TTF2Q9UNY4 1162 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-210ENST00000528149 FRAT2O75474 233 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 TTC39AQ5SRH9 613 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 TSHZ3Q63HK5 1081 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 CENPQQ7L2Z9 268 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 NBPF11Q86T75 865 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 LRCH3Q96II8 777 aa14.11□□□□□ -0.15
CCDC90B-210ENST00000528149 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 MCAMP43121 646 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 CRKP46108 304 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 SH3TC2Q8TF17 1288 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 SLC10A4Q96EP9 437 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 TDRD3Q9H7E2 651 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms