RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 PRMT2P55345 433 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 KIF22Q14807 665 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 GRIK5Q16478 980 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 SLC4A8Q2Y0W8 1093 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
NR1H3-230ENST00000527949 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
NR1H3-230ENST00000527949 OPTNQ96CV9 577 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
NR1H3-230ENST00000527949 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
NR1H3-230ENST00000527949 AOX1Q06278 1338 aa13.78□□□□□ -0.2
NR1H3-230ENST00000527949 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
NR1H3-230ENST00000527949 RBBP6Q7Z6E9 1792 aaKnown RBP13.77□□□□□ -0.21
NR1H3-230ENST00000527949 TMEM57Q8N5G2 664 aa13.77□□□□□ -0.21
NR1H3-230ENST00000527949 HOOK2Q96ED9 719 aa13.77□□□□□ -0.21
NR1H3-230ENST00000527949 PTPN18Q99952 460 aa13.77□□□□□ -0.21
NR1H3-230ENST00000527949 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
NR1H3-230ENST00000527949 FZD1Q9UP38 647 aa13.77□□□□□ -0.21
NR1H3-230ENST00000527949 CSADQ9Y600 493 aa13.77□□□□□ -0.21
NR1H3-230ENST00000527949 POLA2Q14181 598 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
NR1H3-230ENST00000527949 TAF1CQ15572 869 aaPredicted RBP13.76□□□□□ -0.21
NR1H3-230ENST00000527949 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 SSH3Q8TE77 659 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 CLUAP1Q96AJ1 413 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
NR1H3-230ENST00000527949 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 IGSF3O75054 1194 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 MS4A1P11836 297 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 GJA5P36382 358 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 PHKA1P46020 1223 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 CCL15Q16663 113 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
NR1H3-230ENST00000527949 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
NR1H3-230ENST00000527949 ELP3Q9H9T3 547 aa13.75□□□□□ -0.21
NR1H3-230ENST00000527949 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
NR1H3-230ENST00000527949 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
NR1H3-230ENST00000527949 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
NR1H3-230ENST00000527949 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
NR1H3-230ENST00000527949 CETPP11597 493 aa13.74□□□□□ -0.21
NR1H3-230ENST00000527949 TFCP2Q12800 502 aa13.74□□□□□ -0.21
NR1H3-230ENST00000527949 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
NR1H3-230ENST00000527949 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
NR1H3-230ENST00000527949 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
NR1H3-230ENST00000527949 GAKO14976 1311 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 OTOFQ9HC10 1997 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 TLR2O60603 784 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 PRDX5P30044 214 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 ADORA1P30542 326 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 TIMM10P62072 90 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 SPTY2D1Q68D10 685 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-230ENST00000527949 SLF2Q8IX21 1173 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 PTCH2Q9Y6C5 1203 aa13.73□□□□□ -0.21
NR1H3-230ENST00000527949 HTTP42858 3142 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-230ENST00000527949 RLBP1P12271 317 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 CAPN2P17655 700 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 HOXD10P28358 340 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 ARID4AP29374 1257 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-230ENST00000527949 VGLL4Q14135 290 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-230ENST00000527949 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
NR1H3-230ENST00000527949 FAM151AQ8WW52 585 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 TMEM39BQ9GZU3 492 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 MYH2Q9UKX2 1941 aa13.72□□□□□ -0.21
NR1H3-230ENST00000527949 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-230ENST00000527949 SNAPC2Q13487 334 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-230ENST00000527949 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
NR1H3-230ENST00000527949 H0YGN5 161 aa13.7□□□□□ -0.22
NR1H3-230ENST00000527949 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
NR1H3-230ENST00000527949 CDC42EP5Q6NZY7 148 aa13.7□□□□□ -0.22
NR1H3-230ENST00000527949 FAM43AQ8N2R8 423 aa13.7□□□□□ -0.22
NR1H3-230ENST00000527949 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
NR1H3-230ENST00000527949 RFX7Q2KHR2 1363 aa13.7□□□□□ -0.22
NR1H3-230ENST00000527949 ENTPD3O75355 529 aa13.69□□□□□ -0.22
NR1H3-230ENST00000527949 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
NR1H3-230ENST00000527949 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
NR1H3-230ENST00000527949 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
NR1H3-230ENST00000527949 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
NR1H3-230ENST00000527949 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
NR1H3-230ENST00000527949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-230ENST00000527949 MKI67P46013 3256 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms