RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 VGLL4Q14135 290 aa17.55■□□□□ 0.4
CAPN1-212ENST00000527887 CDAN1Q8IWY9 1227 aa17.55■□□□□ 0.4
CAPN1-212ENST00000527887 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
CAPN1-212ENST00000527887 FAM163AQ96GL9 167 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-212ENST00000527887 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-212ENST00000527887 SPDYE5A6NIY4 337 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 ADORA1P30542 326 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 FBXO46Q6PJ61 603 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-212ENST00000527887 ERO1BQ86YB8 467 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 MS4A4AQ96JQ5 239 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
CAPN1-212ENST00000527887 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-212ENST00000527887 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 DIXDC1Q155Q3 683 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 PTPN18Q99952 460 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 R3HDMLQ9H3Y0 253 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 ZCCHC17Q9NP64 241 aaKnown RBP17.53■□□□□ 0.4
CAPN1-212ENST00000527887 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 HPS5Q9UPZ3 1129 aa17.53■□□□□ 0.4
CAPN1-212ENST00000527887 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
CAPN1-212ENST00000527887 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
CAPN1-212ENST00000527887 ERO1AQ96HE7 468 aa17.52■□□□□ 0.4
CAPN1-212ENST00000527887 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.4
CAPN1-212ENST00000527887 IDI2Q9BXS1 227 aa17.52■□□□□ 0.4
CAPN1-212ENST00000527887 GAKO14976 1311 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 ENTPD3O75355 529 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-212ENST00000527887 PPATQ06203 517 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 ARHGEF6Q15052 776 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 GORABQ5T7V8 394 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 GPR108Q9NPR9 543 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 ABCF2Q9UG63 623 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 ZNF112Q9UJU3 913 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 SNCAIPQ9Y6H5 919 aa17.51■□□□□ 0.39
CAPN1-212ENST00000527887 CCL15-CCL14A0A0B4J2E2 113 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 IGSF3O75054 1194 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 CETPP11597 493 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 CRHR2Q13324 411 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 PPIL2Q13356 520 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 SNAPC2Q13487 334 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 POLA2Q14181 598 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 CCL15Q16663 113 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 BRI3BPQ8WY22 251 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 ZFYVE28Q9HCC9 887 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 FAM198AQ9UFP1 575 aa17.5■□□□□ 0.39
CAPN1-212ENST00000527887 LDHCP07864 332 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 UQCRFS1P1P0C7P4 283 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 GSTO1P78417 241 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 SP3Q02447 781 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 TCP10Q12799 353 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 NFIAQ12857 509 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
CAPN1-212ENST00000527887 ZKSCAN4Q969J2 545 aaPredicted RBP17.49■□□□□ 0.39
CAPN1-212ENST00000527887 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-212ENST00000527887 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
CAPN1-212ENST00000527887 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-212ENST00000527887 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
CAPN1-212ENST00000527887 MIGA2Q7L4E1 593 aa17.48■□□□□ 0.39
CAPN1-212ENST00000527887 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
CAPN1-212ENST00000527887 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
CAPN1-212ENST00000527887 GPR75-ASB3A0A0A6YYF3 556 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 IRF6O14896 467 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-212ENST00000527887 MS4A1P11836 297 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 TAF1CQ15572 869 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-212ENST00000527887 OTOP1Q7RTM1 612 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
CAPN1-212ENST00000527887 TRIM17Q9Y577 477 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 LAMB1P07942 1786 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
CAPN1-212ENST00000527887 INPP5BP32019 993 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 RGS3P49796 1198 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 MAP3K10Q02779 954 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 MECOMQ03112 1051 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 CCDC158Q5M9N0 1113 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
CAPN1-212ENST00000527887 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
CAPN1-212ENST00000527887 BTDP43251 543 aa17.45■□□□□ 0.38
CAPN1-212ENST00000527887 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-212ENST00000527887 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
CAPN1-212ENST00000527887 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-212ENST00000527887 EFCC1Q9HA90 598 aa17.45■□□□□ 0.38
CAPN1-212ENST00000527887 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
CAPN1-212ENST00000527887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-212ENST00000527887 CXCL11O14625 94 aa17.44■□□□□ 0.38
CAPN1-212ENST00000527887 TLR2O60603 784 aa17.44■□□□□ 0.38
CAPN1-212ENST00000527887 TNNI3KQ59H18 835 aa17.44■□□□□ 0.38
CAPN1-212ENST00000527887 CD99L2Q8TCZ2 262 aa17.44■□□□□ 0.38
CAPN1-212ENST00000527887 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms