RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MROH7-TTC4A0A0A0MT08 1334 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 FZD9O00144 591 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 LDHCP07864 332 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 RASEFQ8IZ41 740 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 IL27Q8NEV9 243 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 SBF1O95248 1867 aa22.37■■□□□ 1.17
SMPD1-203ENST00000527275 CIAPIN1Q6FI81 312 aa22.36■■□□□ 1.17
SMPD1-203ENST00000527275 FAM163AQ96GL9 167 aaPredicted RBP22.36■■□□□ 1.17
SMPD1-203ENST00000527275 SLF2Q8IX21 1173 aa22.36■■□□□ 1.17
SMPD1-203ENST00000527275 DSCC1Q9BVC3 393 aa22.36■■□□□ 1.17
SMPD1-203ENST00000527275 UPF3BQ9BZI7 483 aaKnown RBP22.36■■□□□ 1.17
SMPD1-203ENST00000527275 RBM8AQ9Y5S9 174 aaKnown RBP22.36■■□□□ 1.17
SMPD1-203ENST00000527275 GMLQ99445 158 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 GAKO14976 1311 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 MYO3BQ8WXR4 1341 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 PRKAB2O43741 272 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 NECTIN1Q15223 517 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 DAGLAQ9Y4D2 1042 aa22.35■■□□□ 1.17
SMPD1-203ENST00000527275 GPR75-ASB3A0A0A6YYF3 556 aa22.34■■□□□ 1.17
SMPD1-203ENST00000527275 APPP05067 770 aa22.34■■□□□ 1.17
SMPD1-203ENST00000527275 KCNB2Q92953 911 aa22.34■■□□□ 1.17
SMPD1-203ENST00000527275 SLC4A4Q9Y6R1 1079 aa22.34■■□□□ 1.17
SMPD1-203ENST00000527275 BTDP43251 543 aa22.33■■□□□ 1.17
SMPD1-203ENST00000527275 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.17
SMPD1-203ENST00000527275 TNIP1Q15025 636 aa22.33■■□□□ 1.17
SMPD1-203ENST00000527275 TEKT1Q969V4 418 aa22.33■■□□□ 1.17
SMPD1-203ENST00000527275 BAG3O95817 575 aa22.33■■□□□ 1.16
SMPD1-203ENST00000527275 PPP4CP60510 307 aa22.33■■□□□ 1.16
SMPD1-203ENST00000527275 HHIPL2Q6UWX4 724 aa22.33■■□□□ 1.16
SMPD1-203ENST00000527275 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.16
SMPD1-203ENST00000527275 DICER1Q9UPY3 1922 aaKnown RBP22.33■■□□□ 1.16
SMPD1-203ENST00000527275 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 PATL2C9JE40 543 aaKnown RBP22.32■■□□□ 1.16
SMPD1-203ENST00000527275 FGAP02671 866 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 GNAT2P19087 354 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 CRKP46108 304 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 NOL10Q9BSC4 688 aaKnown RBP22.32■■□□□ 1.16
SMPD1-203ENST00000527275 RNF181Q9P0P0 153 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 AGBL3Q8NEM8 1001 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 TMX3Q96JJ7 454 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 MRIQ9BWK5 157 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 U3KPZ7 1027 aaPredicted RBP22.32■■□□□ 1.16
SMPD1-203ENST00000527275 ZNF541Q9H0D2 1346 aa22.32■■□□□ 1.16
SMPD1-203ENST00000527275 SH3RF3Q8TEJ3 882 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-203ENST00000527275 EPB41L4AQ9HCS5 686 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-203ENST00000527275 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 GRIN3BO60391 1043 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 ZKSCAN1P17029 563 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-203ENST00000527275 HDLBPQ00341 1268 aaKnown RBP22.31■■□□□ 1.16
SMPD1-203ENST00000527275 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 OGFOD1Q8N543 542 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 CWC22Q9HCG8 908 aaKnown RBP22.31■■□□□ 1.16
SMPD1-203ENST00000527275 SERPINA10Q9UK55 444 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
SMPD1-203ENST00000527275 ADAMTSL1Q8N6G6 1762 aa22.3■■□□□ 1.16
SMPD1-203ENST00000527275 RBM5P52756 815 aaKnown RBP eCLIP22.3■■□□□ 1.16
SMPD1-203ENST00000527275 RAB3GAP1Q15042 981 aa22.3■■□□□ 1.16
SMPD1-203ENST00000527275 APOBEC3HQ6NTF7 200 aaKnown RBP22.3■■□□□ 1.16
SMPD1-203ENST00000527275 IFNL3Q8IZI9 196 aa22.3■■□□□ 1.16
SMPD1-203ENST00000527275 ZDHHC15Q96MV8 337 aa22.3■■□□□ 1.16
SMPD1-203ENST00000527275 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
SMPD1-203ENST00000527275 C9orf131Q5VYM1 1079 aa22.29■■□□□ 1.16
SMPD1-203ENST00000527275 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
SMPD1-203ENST00000527275 SLC27A2O14975 620 aa22.29■■□□□ 1.16
SMPD1-203ENST00000527275 RHBDL3P58872 404 aa22.29■■□□□ 1.16
SMPD1-203ENST00000527275 CYP21A2P08686 494 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
SMPD1-203ENST00000527275 NACAP1Q9BZK3 213 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 TM6SF1Q9BZW5 370 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 TAF6LQ9Y6J9 622 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
SMPD1-203ENST00000527275 ADCK5Q3MIX3 580 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 CERS3Q8IU89 383 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 JAKMIP1Q96N16 626 aaKnown RBP22.28■■□□□ 1.16
SMPD1-203ENST00000527275 TTC14Q96N46 770 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 NAPBQ9H115 298 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 CTNNA3Q9UI47 895 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 HDAC9Q9UKV0 1011 aa22.28■■□□□ 1.16
SMPD1-203ENST00000527275 PLCG2P16885 1265 aa22.27■■□□□ 1.16
SMPD1-203ENST00000527275 MCM4P33991 863 aa22.27■■□□□ 1.16
SMPD1-203ENST00000527275 CUL4AQ13619 759 aa22.27■■□□□ 1.16
SMPD1-203ENST00000527275 CFAP100Q494V2 611 aa22.27■■□□□ 1.16
SMPD1-203ENST00000527275 TNPO1Q92973 898 aaKnown RBP22.27■■□□□ 1.16
SMPD1-203ENST00000527275 RPAP1Q9BWH6 1393 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-203ENST00000527275 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 TDO2P48775 406 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 GMPSP49915 693 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-203ENST00000527275 ALX1Q15699 326 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 ZSWIM6Q9HCJ5 1215 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 DCP1AQ9NPI6 582 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-203ENST00000527275 RPS12P25398 132 aaKnown RBP22.26■■□□□ 1.15
SMPD1-203ENST00000527275 HAND2P61296 217 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 CDC42EP5Q6NZY7 148 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 TEX11Q8IYF3 940 aa22.26■■□□□ 1.15
SMPD1-203ENST00000527275 PRMT6Q96LA8 375 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-203ENST00000527275 ATP8A2Q9NTI2 1148 aa22.25■■□□□ 1.15
SMPD1-203ENST00000527275 USP40Q9NVE5 1235 aa22.25■■□□□ 1.15
SMPD1-203ENST00000527275 USP5P45974 858 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms