RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TNNI2P48788 182 aa17.41■□□□□ 0.38
SSRP1-203ENST00000526696 MFSD14BQ5SR56 506 aa17.41■□□□□ 0.38
SSRP1-203ENST00000526696 GPAT2Q6NUI2 795 aa17.41■□□□□ 0.38
SSRP1-203ENST00000526696 UBE3BQ7Z3V4 1068 aa17.41■□□□□ 0.38
SSRP1-203ENST00000526696 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
SSRP1-203ENST00000526696 CSF1RP07333 972 aa17.4■□□□□ 0.38
SSRP1-203ENST00000526696 IRF5Q13568 498 aa17.4■□□□□ 0.38
SSRP1-203ENST00000526696 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
SSRP1-203ENST00000526696 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSRP1-203ENST00000526696 NEURL1BA8MQ27 555 aa17.39■□□□□ 0.37
SSRP1-203ENST00000526696 CASP7P55210 303 aa17.39■□□□□ 0.37
SSRP1-203ENST00000526696 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 MIGA2Q7L4E1 593 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 ANKLE1Q8NAG6 615 aa17.38■□□□□ 0.37
SSRP1-203ENST00000526696 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
SSRP1-203ENST00000526696 PARK7Q99497 189 aaKnown RBP17.38■□□□□ 0.37
SSRP1-203ENST00000526696 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
SSRP1-203ENST00000526696 MAFAQ8NHW3 353 aaPredicted RBP17.37■□□□□ 0.37
SSRP1-203ENST00000526696 CDX2Q99626 313 aaPredicted RBP17.37■□□□□ 0.37
SSRP1-203ENST00000526696 NBPF3Q9H094 633 aa17.37■□□□□ 0.37
SSRP1-203ENST00000526696 PFASO15067 1338 aa17.37■□□□□ 0.37
SSRP1-203ENST00000526696 TNPO2O14787 897 aaKnown RBP17.36■□□□□ 0.37
SSRP1-203ENST00000526696 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
SSRP1-203ENST00000526696 MDM2Q00987 491 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-203ENST00000526696 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
SSRP1-203ENST00000526696 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
SSRP1-203ENST00000526696 TRIM32Q13049 653 aa17.35■□□□□ 0.37
SSRP1-203ENST00000526696 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
SSRP1-203ENST00000526696 ZNF112Q9UJU3 913 aa17.35■□□□□ 0.37
SSRP1-203ENST00000526696 TAOK2Q9UL54 1235 aa17.35■□□□□ 0.37
SSRP1-203ENST00000526696 PTPRFP10586 1907 aa17.34■□□□□ 0.37
SSRP1-203ENST00000526696 FAM83AQ86UY5 434 aa17.34■□□□□ 0.37
SSRP1-203ENST00000526696 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
SSRP1-203ENST00000526696 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.36
SSRP1-203ENST00000526696 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
SSRP1-203ENST00000526696 PLA2G5P39877 138 aa17.33■□□□□ 0.36
SSRP1-203ENST00000526696 GYG1P46976 350 aa17.33■□□□□ 0.36
SSRP1-203ENST00000526696 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
SSRP1-203ENST00000526696 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
SSRP1-203ENST00000526696 GCKRQ14397 625 aa17.32■□□□□ 0.36
SSRP1-203ENST00000526696 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
SSRP1-203ENST00000526696 APOBEC3HQ6NTF7 200 aaKnown RBP17.32■□□□□ 0.36
SSRP1-203ENST00000526696 OGDHLQ9ULD0 1010 aa17.32■□□□□ 0.36
SSRP1-203ENST00000526696 PLIN1O60240 522 aa17.31■□□□□ 0.36
SSRP1-203ENST00000526696 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
SSRP1-203ENST00000526696 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
SSRP1-203ENST00000526696 FKBP1CQ5VVH2 108 aa17.31■□□□□ 0.36
SSRP1-203ENST00000526696 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
SSRP1-203ENST00000526696 FAM84BQ96KN1 310 aaPredicted RBP17.31■□□□□ 0.36
SSRP1-203ENST00000526696 BDP1A6H8Y1 2624 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 CXCL11O14625 94 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 COL6A1P12109 1028 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
SSRP1-203ENST00000526696 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 MYLIPQ8WY64 445 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 SYMPKQ92797 1274 aaKnown RBP17.3■□□□□ 0.36
SSRP1-203ENST00000526696 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
SSRP1-203ENST00000526696 SEMA6BQ9H3T3 888 aa17.3■□□□□ 0.36
SSRP1-203ENST00000526696 PLXNB2O15031 1838 aa17.29■□□□□ 0.36
SSRP1-203ENST00000526696 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-203ENST00000526696 HMGCRP04035 888 aa17.29■□□□□ 0.36
SSRP1-203ENST00000526696 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
SSRP1-203ENST00000526696 FOXO4P98177 505 aa17.29■□□□□ 0.36
SSRP1-203ENST00000526696 G2E3Q7L622 706 aa17.29■□□□□ 0.36
SSRP1-203ENST00000526696 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-203ENST00000526696 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
SSRP1-203ENST00000526696 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 TEKT1Q969V4 418 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 COA7Q96BR5 231 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 TTYH1Q9H313 450 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-203ENST00000526696 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-203ENST00000526696 GJD2Q9UKL4 321 aa17.28■□□□□ 0.36
SSRP1-203ENST00000526696 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-203ENST00000526696 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
SSRP1-203ENST00000526696 IFIT5Q13325 482 aaKnown RBP17.27■□□□□ 0.36
SSRP1-203ENST00000526696 ANKRD13CQ8N6S4 541 aa17.27■□□□□ 0.36
SSRP1-203ENST00000526696 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
SSRP1-203ENST00000526696 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.36
SSRP1-203ENST00000526696 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
SSRP1-203ENST00000526696 GADL1Q6ZQY3 521 aa17.26■□□□□ 0.35
SSRP1-203ENST00000526696 FAM122AQ96E09 287 aa17.26■□□□□ 0.35
SSRP1-203ENST00000526696 SLC45A1Q9Y2W3 748 aa17.26■□□□□ 0.35
SSRP1-203ENST00000526696 PIEZO1Q92508 2521 aa17.26■□□□□ 0.35
SSRP1-203ENST00000526696 MYO9BQ13459 2157 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
SSRP1-203ENST00000526696 FASTKD5Q7L8L6 764 aaKnown RBP17.25■□□□□ 0.35
SSRP1-203ENST00000526696 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 TRIB2Q92519 343 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 ZHX2Q9Y6X8 837 aa17.25■□□□□ 0.35
SSRP1-203ENST00000526696 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
SSRP1-203ENST00000526696 TCP10Q12799 353 aa17.24■□□□□ 0.35
SSRP1-203ENST00000526696 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms