RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 PDGFAP04085 211 aa8.52□□□□□ -1.05
C11orf54-203ENST00000526335 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
C11orf54-203ENST00000526335 DBX2Q6ZNG2 339 aa8.52□□□□□ -1.05
C11orf54-203ENST00000526335 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
C11orf54-203ENST00000526335 NPIPB6E9PJ23 425 aa8.51□□□□□ -1.05
C11orf54-203ENST00000526335 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-203ENST00000526335 PRR23BQ6ZRT6 265 aa8.51□□□□□ -1.05
C11orf54-203ENST00000526335 RELTQ969Z4 430 aa8.51□□□□□ -1.05
C11orf54-203ENST00000526335 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
C11orf54-203ENST00000526335 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
C11orf54-203ENST00000526335 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-203ENST00000526335 A6NHS1 94 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 HOXA5P20719 270 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-203ENST00000526335 AOC3Q16853 763 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 SEZ6L2Q6UXD5 910 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 TMEM102Q8N9M5 508 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-203ENST00000526335 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 FAM105AQ9NUU6 356 aa8.5□□□□□ -1.05
C11orf54-203ENST00000526335 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-203ENST00000526335 GSTM4Q03013 218 aa8.49□□□□□ -1.05
C11orf54-203ENST00000526335 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
C11orf54-203ENST00000526335 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
C11orf54-203ENST00000526335 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-203ENST00000526335 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
C11orf54-203ENST00000526335 KRT1P04264 644 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 ANGEL2Q5VTE6 544 aaKnown RBP8.48□□□□□ -1.05
C11orf54-203ENST00000526335 MPZL3Q6UWV2 235 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 OSMRQ99650 979 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 CHRDQ9H2X0 955 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
C11orf54-203ENST00000526335 PRDM7Q9NQW5 492 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 MPSTP25325 297 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
C11orf54-203ENST00000526335 AKAP4Q5JQC9 854 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 ZKSCAN3Q9BRR0 538 aa8.48□□□□□ -1.05
C11orf54-203ENST00000526335 ASPAP45381 313 aa8.47□□□□□ -1.05
C11orf54-203ENST00000526335 ALKBH2Q6NS38 261 aa8.47□□□□□ -1.05
C11orf54-203ENST00000526335 HRASLS5Q96KN8 279 aa8.47□□□□□ -1.05
C11orf54-203ENST00000526335 EREGO14944 169 aa8.46□□□□□ -1.06
C11orf54-203ENST00000526335 PHACTR2O75167 634 aa8.46□□□□□ -1.06
C11orf54-203ENST00000526335 EDN3P14138 238 aa8.46□□□□□ -1.06
C11orf54-203ENST00000526335 AAMPQ13685 434 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
C11orf54-203ENST00000526335 CIAPIN1Q6FI81 312 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-203ENST00000526335 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 POLIQ9UNA4 740 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 AP4E1Q9UPM8 1137 aa8.45□□□□□ -1.06
C11orf54-203ENST00000526335 FAM87AP0C7U9 286 aa8.44□□□□□ -1.06
C11orf54-203ENST00000526335 FYB2Q5VWT5 728 aa8.44□□□□□ -1.06
C11orf54-203ENST00000526335 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
C11orf54-203ENST00000526335 RAD18Q9NS91 495 aa8.44□□□□□ -1.06
C11orf54-203ENST00000526335 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
C11orf54-203ENST00000526335 ESRRAP11474 423 aaPredicted RBP8.43□□□□□ -1.06
C11orf54-203ENST00000526335 ARHGAP27Q6ZUM4 889 aa8.43□□□□□ -1.06
C11orf54-203ENST00000526335 TMEM253P0C7T8 217 aa8.42□□□□□ -1.06
C11orf54-203ENST00000526335 EHHADHQ08426 723 aa8.42□□□□□ -1.06
C11orf54-203ENST00000526335 KCNA10Q16322 511 aa8.42□□□□□ -1.06
C11orf54-203ENST00000526335 FBXO15Q8NCQ5 510 aaPredicted RBP8.42□□□□□ -1.06
C11orf54-203ENST00000526335 BHLHE41Q9C0J9 482 aaPredicted RBP8.42□□□□□ -1.06
C11orf54-203ENST00000526335 U3KQE9 123 aa8.42□□□□□ -1.06
C11orf54-203ENST00000526335 GLI1P08151 1106 aa8.41□□□□□ -1.06
C11orf54-203ENST00000526335 AFMP43652 599 aa8.41□□□□□ -1.06
C11orf54-203ENST00000526335 USP5P45974 858 aa8.41□□□□□ -1.06
C11orf54-203ENST00000526335 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
C11orf54-203ENST00000526335 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
C11orf54-203ENST00000526335 CTNND2Q9UQB3 1225 aa8.41□□□□□ -1.06
C11orf54-203ENST00000526335 TMEM265A0A087WTH1 108 aa8.4□□□□□ -1.06
C11orf54-203ENST00000526335 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
C11orf54-203ENST00000526335 FOXD2O60548 495 aaPredicted RBP8.4□□□□□ -1.06
C11orf54-203ENST00000526335 MAOBP27338 520 aa8.4□□□□□ -1.06
C11orf54-203ENST00000526335 CDK5R2Q13319 367 aa8.4□□□□□ -1.06
C11orf54-203ENST00000526335 AMOTL2Q9Y2J4 779 aa8.4□□□□□ -1.06
C11orf54-203ENST00000526335 DIRC2Q96SL1 478 aa8.39□□□□□ -1.07
C11orf54-203ENST00000526335 NRSN2Q9GZP1 204 aa8.39□□□□□ -1.07
C11orf54-203ENST00000526335 LATS2Q9NRM7 1088 aa8.39□□□□□ -1.07
C11orf54-203ENST00000526335 PSPNO60542 156 aa8.38□□□□□ -1.07
C11orf54-203ENST00000526335 FAM13AO94988 1023 aa8.38□□□□□ -1.07
C11orf54-203ENST00000526335 ATG14Q6ZNE5 492 aa8.38□□□□□ -1.07
C11orf54-203ENST00000526335 CTSBP07858 339 aa8.37□□□□□ -1.07
C11orf54-203ENST00000526335 SSFA2P28290 1259 aa8.37□□□□□ -1.07
C11orf54-203ENST00000526335 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
C11orf54-203ENST00000526335 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-203ENST00000526335 PEAR1Q5VY43 1037 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-203ENST00000526335 ARID3AQ99856 593 aa8.37□□□□□ -1.07
C11orf54-203ENST00000526335 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-203ENST00000526335 NSUN3Q9H649 340 aaKnown RBP8.37□□□□□ -1.07
C11orf54-203ENST00000526335 CD320Q9NPF0 282 aa8.37□□□□□ -1.07
C11orf54-203ENST00000526335 CEACAM5P06731 702 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 NPR3P17342 541 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 KIRREL1Q96J84 757 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 PARD6AQ9NPB6 346 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 MTMR7Q9Y216 660 aa8.36□□□□□ -1.07
C11orf54-203ENST00000526335 TCAF2A6NFQ2 919 aa8.35□□□□□ -1.07
C11orf54-203ENST00000526335 METTL12A8MUP2 240 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms