RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SSFA2P28290 1259 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 C8orf34Q49A92 452 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 CYP27C1Q4G0S4 372 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 OGFOD3Q6PK18 319 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 NPAS4Q8IUM7 802 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ASAP3Q8TDY4 903 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 STK32AQ8WU08 396 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 FAM168AQ92567 244 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ZKSCAN3Q9BRR0 538 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ZMIZ1Q9ULJ6 1067 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 ACTL7BQ9Y614 415 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 CARMIL2Q6F5E8 1435 aa4.45□□□□□ -1.7
TRAPPC4-207ENST00000526141 CADPSQ9ULU8 1353 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 ANKRD33BA6NCL7 494 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 RAB6AP20340 208 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 DNM1Q05193 864 aaKnown RBP4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 DYMQ7RTS9 669 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 BHLHE22Q8NFJ8 381 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 EDEM1Q92611 657 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 BHLHE41Q9C0J9 482 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 BCL11AQ9H165 835 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 SEMA6CQ9H3T2 930 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 RAD18Q9NS91 495 aa4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC4-207ENST00000526141 MZF1P28698 734 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 NAALADL2Q58DX5 795 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 SPRED2Q7Z698 418 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 ATCAYQ86WG3 371 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 GLIS3Q8NEA6 775 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 FAM84AQ96KN4 292 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 CHRDQ9H2X0 955 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 ACSS3Q9H6R3 686 aa4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 RC3H2Q9HBD1 1191 aaKnown RBP4.43□□□□□ -1.7
TRAPPC4-207ENST00000526141 PHACTR2O75167 634 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 RECKO95980 971 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 PDGFAP04085 211 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 FUT4P22083 530 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 ASPAP45381 313 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 AKAP4Q5JQC9 854 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 ZNF574Q6ZN55 896 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 PI4K2BQ8TCG2 481 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 NETO1Q8TDF5 533 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 CLP1Q92989 425 aaKnown RBP4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 GGNBP2Q9H3C7 697 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 CWC22Q9HCG8 908 aaKnown RBP4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 FAM53CQ9NYF3 392 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 BIN2Q9UBW5 565 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 PPP1R1BQ9UD71 204 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 VAV3Q9UKW4 847 aa4.42□□□□□ -1.7
TRAPPC4-207ENST00000526141 ANKRD62A6NC57 917 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 EREGO14944 169 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 MAOBP27338 520 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 SERPINB4P48594 390 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 EHHADHQ08426 723 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 POU4F3Q15319 338 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 ALKBH2Q6NS38 261 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 SEZ6L2Q6UXD5 910 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 FBXO33Q7Z6M2 555 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 SNX29Q8TEQ0 813 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 NRSN2Q9GZP1 204 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 GSX1Q9H4S2 264 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 C1GALT1Q9NS00 363 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 FAM105AQ9NUU6 356 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 AP4E1Q9UPM8 1137 aa4.41□□□□□ -1.7
TRAPPC4-207ENST00000526141 TNFRSF21O75509 655 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 USP5P45974 858 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 PRKCQQ04759 706 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 PCDH1Q08174 1060 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 BNIP3Q12983 259 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 HELQQ8TDG4 1101 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 TOX2Q96NM4 488 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 CORO1BQ9BR76 489 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 HIRIP3Q9BW71 556 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 CLEC4MQ9H2X3 399 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 SLAIN2Q9P270 581 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 DAGLAQ9Y4D2 1042 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 SYNGAP1Q96PV0 1343 aa4.4□□□□□ -1.71
TRAPPC4-207ENST00000526141 A6NHS1 94 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 LRRC10BA6NIK2 292 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 RNASE1P07998 156 aaKnown RBP4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 CD8BP10966 210 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 ATP2B4P23634 1241 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 WFDC3Q8IUB2 231 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 ZSCAN18Q8TBC5 510 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 MKNK2Q9HBH9 465 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 MBNL3Q9NUK0 354 aaKnown RBP4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 SEPT3Q9UH03 358 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 EGFL7Q9UHF1 273 aa4.39□□□□□ -1.71
TRAPPC4-207ENST00000526141 A0A096LPE4 126 aa4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 A0A1W2PPZ6 126 aa4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 ERCC5P28715 1186 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 RAP1GAPP47736 663 aa4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 EIF1AXP47813 144 aaKnown RBP4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 HNRNPUQ00839 825 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 MESP2Q0VG99 397 aa4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 IFI16Q16666 785 aaKnown RBP4.38□□□□□ -1.71
TRAPPC4-207ENST00000526141 ARHGAP27Q6ZUM4 889 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms