RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 PCDH1Q08174 1060 aa7.29□□□□□ -1.24
CSDE1-211ENST00000525970 MAP7Q14244 749 aa7.29□□□□□ -1.24
CSDE1-211ENST00000525970 ZSCAN29Q8IWY8 852 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-211ENST00000525970 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
CSDE1-211ENST00000525970 TBC1D32Q96NH3 1257 aa7.29□□□□□ -1.24
CSDE1-211ENST00000525970 BSDC1Q9NW68 430 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-211ENST00000525970 A0A096LPE4 126 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 A0A1W2PPZ6 126 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 METTL12A8MUP2 240 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 CYP26A1O43174 497 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 CPNE3O75131 537 aaKnown RBP7.28□□□□□ -1.24
CSDE1-211ENST00000525970 RECKO95980 971 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 PLCB3Q01970 1234 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 CYP27A1Q02318 531 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 USPL1Q5W0Q7 1092 aa7.28□□□□□ -1.24
CSDE1-211ENST00000525970 DDX54Q8TDD1 881 aaKnown RBP7.28□□□□□ -1.24
CSDE1-211ENST00000525970 A0A1W2PP55 124 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 EIF1AYO14602 144 aaKnown RBP7.27□□□□□ -1.25
CSDE1-211ENST00000525970 MAOBP27338 520 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 ADMP35318 185 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 POU4F3Q15319 338 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 GATA6Q92908 595 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 TCF12Q99081 682 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 LIN7BQ9HAP6 207 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 ACTL7BQ9Y614 415 aa7.27□□□□□ -1.25
CSDE1-211ENST00000525970 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-211ENST00000525970 IGHA2P01877 340 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 ZNF423Q2M1K9 1284 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 NFXL1Q6ZNB6 911 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 CBLL1Q75N03 491 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 SHISA5Q8N114 240 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 ALKBH8Q96BT7 664 aaKnown RBP7.26□□□□□ -1.25
CSDE1-211ENST00000525970 C8orf37Q96NL8 207 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 CSRNP1Q96S65 589 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
CSDE1-211ENST00000525970 GRIA4P48058 902 aa7.25□□□□□ -1.25
CSDE1-211ENST00000525970 KIAA0319Q5VV43 1072 aa7.25□□□□□ -1.25
CSDE1-211ENST00000525970 AGBL5Q8NDL9 886 aa7.25□□□□□ -1.25
CSDE1-211ENST00000525970 GSX1Q9H4S2 264 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-211ENST00000525970 ACSS3Q9H6R3 686 aa7.25□□□□□ -1.25
CSDE1-211ENST00000525970 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
CSDE1-211ENST00000525970 FAM170BA6NMN3 283 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 TREHO43280 583 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 B3GALT4O96024 378 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 P4HBP07237 508 aaKnown RBP7.24□□□□□ -1.25
CSDE1-211ENST00000525970 NFICP08651 508 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 MAPK8P45983 427 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 FMR1Q06787 632 aaKnown RBP eCLIP7.24□□□□□ -1.252e-19■□□□□ 8.5
CSDE1-211ENST00000525970 MRPL58Q14197 206 aaKnown RBP7.24□□□□□ -1.25
CSDE1-211ENST00000525970 SPRED3Q2MJR0 410 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 TP53INP2Q8IXH6 220 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 CCDC74AQ96AQ1 378 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 CORO1BQ9BR76 489 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 USP35Q9P2H5 1018 aa7.24□□□□□ -1.25
CSDE1-211ENST00000525970 CTSBP07858 339 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 JUNBP17275 347 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-211ENST00000525970 DSC3Q14574 896 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 EAPPQ56P03 285 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-211ENST00000525970 LDLRAD1Q5T700 205 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 DYMQ7RTS9 669 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 ASIC4Q96FT7 647 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 TRIM56Q9BRZ2 755 aaKnown RBP7.23□□□□□ -1.25
CSDE1-211ENST00000525970 SEMA6CQ9H3T2 930 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 NPHS2Q9NP85 383 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 RAD18Q9NS91 495 aa7.23□□□□□ -1.25
CSDE1-211ENST00000525970 PNMA6FA0A0J9YX94 578 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-211ENST00000525970 ITGB5P18084 799 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 RAB6AP20340 208 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 ITPKAP23677 461 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 PTPN12Q05209 780 aaKnown RBP7.22□□□□□ -1.25
CSDE1-211ENST00000525970 AKAP4Q5JQC9 854 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 FLCNQ8NFG4 579 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 EHD4Q9H223 541 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 ZNF576Q9H609 170 aa7.22□□□□□ -1.25
CSDE1-211ENST00000525970 ASPAP45381 313 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 SEZ6L2Q6UXD5 910 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 PAK6Q9NQU5 681 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-211ENST00000525970 FAM105AQ9NUU6 356 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 NLRP2Q9NX02 1062 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 ZC3H7BQ9UGR2 993 aaKnown RBP7.21□□□□□ -1.26
CSDE1-211ENST00000525970 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
CSDE1-211ENST00000525970 FZD5Q13467 585 aa7.2□□□□□ -1.26
CSDE1-211ENST00000525970 ENOX2Q16206 610 aaKnown RBP7.2□□□□□ -1.26
CSDE1-211ENST00000525970 ZNF765Q7L2R6 523 aa7.2□□□□□ -1.26
CSDE1-211ENST00000525970 EPS8L3Q8TE67 593 aaKnown RBP7.2□□□□□ -1.26
CSDE1-211ENST00000525970 AOC2O75106 756 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 RPS26P11Q5JNZ5 115 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-211ENST00000525970 OGFOD2Q6N063 350 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 OGFOD3Q6PK18 319 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 BACH2Q9BYV9 841 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 LRRC4CQ9HCJ2 640 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 C1GALT1Q9NS00 363 aa7.19□□□□□ -1.26
CSDE1-211ENST00000525970 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms