RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CASP7P55210 303 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 CDC37Q16543 378 aaPredicted RBP5.5□□□□□ -1.53
CD44-213ENST00000525209 TBC1D10BQ4KMP7 808 aaPredicted RBP5.5□□□□□ -1.53
CD44-213ENST00000525209 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 NECAB2Q7Z6G3 386 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ANKRD23Q86SG2 305 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ZNF354CQ86Y25 554 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 STAG2Q8N3U4 1231 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 RIN3Q8TB24 985 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 CHMP4CQ96CF2 233 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 TSPAN10Q9H1Z9 355 aaPredicted RBP5.5□□□□□ -1.53
CD44-213ENST00000525209 ALDH8A1Q9H2A2 487 aaPredicted RBP5.5□□□□□ -1.53
CD44-213ENST00000525209 RETREG1Q9H6L5 497 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ATP13A2Q9NQ11 1180 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 STRN4Q9NRL3 753 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 AASDHPPTQ9NRN7 309 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ATG3Q9NT62 314 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 ACTR10Q9NZ32 417 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 HDAC9Q9UKV0 1011 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 MAPRE3Q9UPY8 281 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 IPPQ9Y573 584 aa5.5□□□□□ -1.53
CD44-213ENST00000525209 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 ANO9A1A5B4 782 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 GSG1L2A8MUP6 293 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 RFPL3O75679 317 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 SNRPBP14678 240 aaKnown RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 TYRP1P17643 537 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 SERPINB3P29508 390 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 DDIT3P35638 169 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 EPHA4P54764 986 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 GPSM2P81274 684 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 MTMR1Q13613 665 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 NBPF20Q3BBV1 942 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 FBXL19Q6PCT2 694 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 TOGARAM2Q6ZUX3 1019 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 SPATC1Q76KD6 591 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 ZSCAN30Q86W11 494 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 ZNF511Q8NB15 262 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 CCDC74AQ96AQ1 378 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 TMEM74Q96NL1 305 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 CWC25Q9NXE8 425 aaPredicted RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 PFDN2Q9UHV9 154 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 EVLQ9UI08 416 aaPredicted RBP5.49□□□□□ -1.53
CD44-213ENST00000525209 ZNF180Q9UJW8 692 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 SLC45A1Q9Y2W3 748 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 PCDHB11Q9Y5F2 797 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 PHLDB1Q86UU1 1377 aa5.49□□□□□ -1.53
CD44-213ENST00000525209 VSTM5A8MXK1 200 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 BACH1O14867 736 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 GREM1O60565 184 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 TNFRSF21O75509 655 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 FAM200BP0CF97 657 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 BMP1P13497 986 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 CPEP16870 476 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 GBP2P32456 591 aaPredicted RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 GIPRP48546 466 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
CD44-213ENST00000525209 SEPT6Q14141 434 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 KRT72Q14CN4 511 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 SETDB1Q15047 1291 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 FXNQ16595 210 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 TMEM67Q5HYA8 995 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 TTLL5Q6EMB2 1281 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 PPP4R3AQ6IN85 833 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 CCDC81Q6ZN84 652 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 NBPF11Q86T75 865 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 ZBTB46Q86UZ6 589 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 IFNL2Q8IZJ0 200 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 SCLT1Q96NL6 688 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 SERINC2Q96SA4 455 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
CD44-213ENST00000525209 CSRNP2Q9H175 543 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 PGAP2Q9UHJ9 254 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 ZMYM5Q9UJ78 669 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 WASF2Q9Y6W5 498 aa5.48□□□□□ -1.53
CD44-213ENST00000525209 GOLIM4O00461 696 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 FIBPO43427 364 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ORC4O43929 436 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ABLIM3O94929 683 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 HSP90AB1P08238 724 aaKnown RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 PHKG2P15735 406 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 PCSK2P16519 638 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 GARTP22102 1010 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 IRS1P35568 1242 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ZAP70P43403 619 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ZNF280AP59817 542 aaPredicted RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 FAM160A1Q05DH4 1040 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 GRIN2CQ14957 1233 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 TOMM20Q15388 145 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms