RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 FAM83AQ86UY5 434 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 IFNL1Q8IU54 200 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 ZFPM1Q8IX07 1006 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 ZNF384Q8TF68 577 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 ZNF296Q8WUU4 475 aaPredicted RBP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 CFHR5Q9BXR6 569 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 ELP3Q9H9T3 547 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 MANSC4A6NHS7 340 aaPredicted RBP15.52■□□□□ 0.08
SMCO4-202ENST00000525141 CCDC85CA6NKD9 419 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 GPR25O00155 361 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 TNNI2P48788 182 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 INHBEP58166 350 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 NFIAQ12857 509 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 SSH3Q8TE77 659 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 C1orf115Q9H7X2 142 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 FAM198AQ9UFP1 575 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 AKAP2Q9Y2D5 859 aa15.52■□□□□ 0.08
SMCO4-202ENST00000525141 MAST3O60307 1309 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 LDHBP07195 334 aaKnown RBP15.51■□□□□ 0.07
SMCO4-202ENST00000525141 SREBF2Q12772 1141 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-202ENST00000525141 FAM151AQ8WW52 585 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-202ENST00000525141 NEUROD6Q96NK8 337 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 USP40Q9NVE5 1235 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 HMG20BQ9P0W2 317 aa15.51■□□□□ 0.07
SMCO4-202ENST00000525141 RGS19P49795 217 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMCO4-202ENST00000525141 VGLL4Q14135 290 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 NOM1Q5C9Z4 860 aaKnown RBP15.5■□□□□ 0.07
SMCO4-202ENST00000525141 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 MIGA2Q7L4E1 593 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
SMCO4-202ENST00000525141 OPTNQ96CV9 577 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 MYH13Q9UKX3 1938 aa15.5■□□□□ 0.07
SMCO4-202ENST00000525141 TCP10Q12799 353 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 PDE3AQ14432 1141 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 TBC1D9Q6ZT07 1266 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 SH3BP5LQ7L8J4 393 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 CTU1Q7Z7A3 348 aaKnown RBP15.49■□□□□ 0.07
SMCO4-202ENST00000525141 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 ZNF112Q9UJU3 913 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
SMCO4-202ENST00000525141 SNCAIPQ9Y6H5 919 aa15.49■□□□□ 0.07
SMCO4-202ENST00000525141 GAKO14976 1311 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 PDS5AQ29RF7 1337 aaKnown RBP15.48■□□□□ 0.07
SMCO4-202ENST00000525141 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 CAP1Q01518 475 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 BRI3BPQ8WY22 251 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 ABCF2Q9UG63 623 aa15.48■□□□□ 0.07
SMCO4-202ENST00000525141 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 INPP5BP32019 993 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 MECOMQ03112 1051 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
SMCO4-202ENST00000525141 ITPRIPQ8IWB1 547 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 SPATA5Q8NB90 893 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 IDI2Q9BXS1 227 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 GPR108Q9NPR9 543 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 TMOD2Q9NZR1 351 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 LAMB1P07942 1786 aa15.47■□□□□ 0.07
SMCO4-202ENST00000525141 GPR75-ASB3A0A0A6YYF3 556 aa15.46■□□□□ 0.07
SMCO4-202ENST00000525141 FKTNO75072 461 aa15.46■□□□□ 0.07
SMCO4-202ENST00000525141 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
SMCO4-202ENST00000525141 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-202ENST00000525141 MCAMP43121 646 aa15.46■□□□□ 0.07
SMCO4-202ENST00000525141 RHBDL3P58872 404 aa15.46■□□□□ 0.07
SMCO4-202ENST00000525141 DBNDD2Q9BQY9 259 aa15.46■□□□□ 0.07
SMCO4-202ENST00000525141 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
SMCO4-202ENST00000525141 SPDYE5A6NIY4 337 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 WDHD1O75717 1129 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-202ENST00000525141 MAP3K10Q02779 954 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 CRHR2Q13324 411 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 CEP85Q6P2H3 762 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 ZGPATQ8N5A5 531 aaKnown RBP15.45■□□□□ 0.06
SMCO4-202ENST00000525141 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
SMCO4-202ENST00000525141 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 WRNIP1Q96S55 665 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
SMCO4-202ENST00000525141 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-202ENST00000525141 PHF20L1A8MW92 1017 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 IRF6O14896 467 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 RGS3P49796 1198 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 SPTY2D1Q68D10 685 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-202ENST00000525141 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 EAF2Q96CJ1 260 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-202ENST00000525141 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
SMCO4-202ENST00000525141 SNRKQ9NRH2 765 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
SMCO4-202ENST00000525141 CSADQ9Y600 493 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms